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Precomputed Genomes - PSORTb v.2.0
 
The following bacterial chromsome RefSeqs from NCBI's Genome database have been analyzed using PSORTb version 2.0. Two files are available for each genome - the inputted FASTA file (accession.faa) and the outputted PSORTb results in tab-delimited text format (accession.out). The tab delimited text file can easily be imported into your favourite spreadsheet or database program. The old precomputed genomes page, using PSORT-B v.1.1.2, is available here.
 
The same information can be also browsed at PSORTdb, a database containing both proteins of experimentally verified localization as well as predictions of localization for sequenced bacterial genomes. PSORTdb contains predictions and associated information for all of the genomes below generated with both PSORTb v.1.1.2 and 2.0. The data can be searched, browsed, BLASTed against and downloaded in a variety of combinations, making queries such as "show all Gram-negative cytoplasmic proteins" or "show all P. aeruginosa proteins with a predicted signal peptide" possible. Click here to visit PSORTdb.
 
If you have a favourite genome you'd like to see analyzed, contact us!
 
     
Gram-negative bacterial chromosomes:    
Organism (listed by phylum/class) Input PSORTb Output
Acidobacteria
Acidobacteria bacterium Ellin345 NC_008009.faa NC_008009.out
Solibacter usitatus Ellin6076 NC_008536.faa NC_008536.out
Alphaproteobacteria
Acidiphilium cryptum JF-5 NC_009484.faa NC_009484.out
Acidiphilium cryptum JF-5 plasmid pACRY01 NC_009467.faa NC_009467.out
Acidiphilium cryptum JF-5 plasmid pACRY02 NC_009468.faa NC_009468.out
Acidiphilium cryptum JF-5 plasmid pACRY03 NC_009469.faa NC_009469.out
Acidiphilium cryptum JF-5 plasmid pACRY04 NC_009470.faa NC_009470.out
Acidiphilium cryptum JF-5 plasmid pACRY05 NC_009471.faa NC_009471.out
Acidiphilium cryptum JF-5 plasmid pACRY06 NC_009472.faa NC_009472.out
Acidiphilium cryptum JF-5 plasmid pACRY07 NC_009473.faa NC_009473.out
Acidiphilium cryptum JF-5 plasmid pACRY08 NC_009474.faa NC_009474.out
Agrobacterium tumefaciens C58 (U. Washington) circular chromosome NC_003304.faa NC_003304.out
Agrobacterium tumefaciens C58 (U. Washington) linear chromosome NC_003305.faa NC_003305.out
Agrobacterium tumefaciens str. C58 plasmid AT (U. Washington) NC_003306.faa NC_003306.out
Agrobacterium tumefaciens str. C58 plasmid Ti (U. Washington) NC_003308.faa NC_003308.out
Agrobacterium tumefaciens C58 (Cereon) circular chromosome NC_003062.faa NC_003062.out
Agrobacterium tumefaciens C58 (Cereon) linear chromosome NC_003063.faa NC_003063.out
Agrobacterium tumefaciens str. C58 plasmid AT (Cereon) NC_003064.faa NC_003064.out
Agrobacterium tumefaciens str. C58 plasmid Ti (Cereon) NC_003065.faa NC_003065.out
Anaplasma marginale St. Maries NC_004842.faa NC_004842.out
Anaplasma phagocytophilum HZ NC_007797.faa NC_007797.out
Azorhizobium caulinodans ORS 571 NC_009937.faa NC_009937.out
Bartonella bacilliformis KC583 NC_008783.faa NC_008783.out
Bartonella henselae Houston-1 NC_005956.faa NC_005956.out
Bartonella quintana Toulouse NC_005955.faa NC_005955.out
Bradyrhizobium sp. BTAi1 NC_009485.faa NC_009485.out
Bradyrhizobium sp. BTAi1 plasmid pBBta01 NC_009475.faa NC_009475.out
Bradyrhizobium sp. ORS278 NC_009445.faa NC_009445.out
Bradyrhizobium japonicum USDA 110 NC_004463.faa NC_004463.out
Brucella abortus biovar 1 str. 9-941 chromosome 1 NC_006932.faa NC_006932.out
Brucella abortus biovar 1 str. 9-941 chromosome 2 NC_006933.faa NC_006933.out
Brucella melitensis 16M chromosome 1 NC_003317.faa NC_003317.out
Brucella melitensis 16M chromosome 2 NC_003318.faa NC_003318.out
Brucella melitensis biovar Abortus 2308 chromosome 1 NC_007618.faa NC_007618.out
Brucella melitensis biovar Abortus 2308 chromosome 2 NC_007624.faa NC_007624.out
Brucella ovis ATCC 25840 chromosome I NC_009505.faa NC_009505.out
Brucella ovis ATCC 25840 chromosome II NC_009504.faa NC_009504.out
Brucella suis 1330 chromosome 1 NC_004310.faa NC_004310.out
Brucella suis 1330 chromosome 2 NC_004311.faa NC_004311.out
Candidatus Pelagibacter ubique HTCC1062 NC_007205.faa NC_007205.out
Caulobacter crescentus CB15 NC_002696.faa NC_002696.out
Ehrlichia canis str. Jake NC_007354.faa NC_007354.out
Ehrlichia chaffeensis str. Arkansas NC_007799.faa NC_007799.out
Ehrlichia ruminantium Gardel NC_006831.faa NC_006831.out
Ehrlichia ruminantium Welgevonden (CIRAD) NC_006832.faa NC_006832.out
Ehrlichia ruminantium Welgevonden (U. Pretoria) NC_005295.faa NC_005295.out
Erythrobacter litoralis HTCC2594 NC_007722.faa NC_007722.out
Gluconobacter oxydans 621H NC_006677.faa NC_006677.out
Gluconobacter oxydans 621H plasmid pGOX1 NC_006672.faa NC_006672.out
Gluconobacter oxydans 621H plasmid pGOX2 NC_006673.faa NC_006673.out
Gluconobacter oxydans 621H plasmid pGOX3 NC_006674.faa NC_006674.out
Gluconobacter oxydans 621H plasmid pGOX4 NC_006675.faa NC_006675.out
Gluconobacter oxydans 621H plasmid pGOX5 NC_006676.faa NC_006676.out
Granulibacter bethesdensis CGDNIH1 NC_008343.faa NC_008343.out
Hyphomonas neptunium ATCC 15444 NC_008358.faa NC_008358.out
Jannaschia sp. CCS1 NC_007802.faa NC_007802.out
Jannaschia sp. CCS1 plasmid1 NC_007801.faa NC_007801.out
Magnetospirillum magneticum AMB-1 NC_007626.faa NC_007626.out
Maricaulis maris MCS10 NC_008347.faa NC_008347.out
Mesorhizobium sp. BNC1 NC_008254.faa NC_008254.out
Mesorhizobium sp. BNC1 plasmid 1 NC_008242.faa NC_008242.out
Mesorhizobium sp. BNC1 plasmid 2 NC_008243.faa NC_008243.out
Mesorhizobium sp. BNC1 plasmid 3 NC_008244.faa NC_008244.out
Mesorhizobium loti MAFF 303099 NC_002678.faa NC_002678.out
Mesorhizobium loti MAFF303099 plasmid pMLa NC_002679.faa NC_002679.out
Mesorhizobium loti MAFF303099 plasmid pMLb NC_002682.faa NC_002682.out
Neorickettsia sennetsu str. Miyayama NC_007798.faa NC_007798.out
Nitrobacter hamburgensis X14 NC_007964.faa NC_007964.out
Nitrobacter hamburgensis X14 plasmid 1 NC_007959.faa NC_007959.out
Nitrobacter hamburgensis X14 plasmid 2 NC_007960.faa NC_007960.out
Nitrobacter hamburgensis X14 plasmid 3 NC_007961.faa NC_007961.out
Nitrobacter winogradskyi Nb-255 NC_007406.faa NC_007406.out
Novosphingobium aromaticivorans DSM 12444 NC_007794.faa NC_007794.out
Novosphingobium aromaticivorans DSM 12444 plasmid pNL1 NC_009426.faa NC_009426.out
Novosphingobium aromaticivorans DSM 12444 plasmid pNL2 NC_009427.faa NC_009427.out
Ochrobactrum anthropi ATCC 49188 chromosome 1 NC_009667.faa NC_009667.out
Ochrobactrum anthropi ATCC 49188 chromosome 2 NC_009668.faa NC_009668.out
Ochrobactrum anthropi ATCC 49188 plasmid pOANT01 NC_009669.faa NC_009669.out
Ochrobactrum anthropi ATCC 49188 plasmid pOANT02 NC_009670.faa NC_009670.out
Ochrobactrum anthropi ATCC 49188 plasmid pOANT03 NC_009671.faa NC_009671.out
Ochrobactrum anthropi ATCC 49188 plasmid pOANT04 NC_009672.faa NC_009672.out
Orientia tsutsugamushi Boryong NC_009488.faa NC_009488.out
Paracoccus denitrificans PD1222 chromosome 1 NC_008686.faa NC_008686.out
Paracoccus denitrificans PD1222 chromosome 2 NC_008687.faa NC_008687.out
Paracoccus denitrificans PD1222 plasmid 1 NC_008688.faa NC_008688.out
Parvibaculum lavamentivorans DS-1 NC_009719.faa NC_009719.out
Rhizobium etli CFN 42 NC_007761.faa NC_007761.out
Rhizobium etli CFN 42 plasmid p42a NC_007762.faa NC_007762.out
Rhizobium etli CFN 42 plasmid p42b NC_007763.faa NC_007763.out
Rhizobium etli CFN 42 plasmid p42c NC_007764.faa NC_007764.out
Rhizobium etli CFN 42 plasmid p42e NC_007765.faa NC_007765.out
Rhizobium etli CFN 42 plasmid p42f NC_007766.faa NC_007766.out
Rhizobium etli CFN 42 symbiotic plasmid p42d NC_004041.faa NC_004041.out
Rhizobium leguminosarum bv. viciae 3841 NC_008380.faa NC_008380.out
Rhizobium leguminosarum bv. viciae 3841 plasmid pRL7 NC_008382.faa NC_008382.out
Rhizobium leguminosarum bv. viciae 3841 plasmid pRL8 NC_008383.faa NC_008383.out
Rhizobium leguminosarum bv. viciae 3841 plasmid pRL9 NC_008379.faa NC_008379.out
Rhizobium leguminosarum bv. viciae 3841 plasmid pRL10 NC_008381.faa NC_008381.out
Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11 NC_008384.faa NC_008384.out
Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12 NC_008378.faa NC_008378.out
Rhodobacter sphaeroides 2.4.1 chromosome 1 NC_007493.faa NC_007493.out
Rhodobacter sphaeroides 2.4.1 chromosome 2 NC_007494.faa NC_007494.out
Rhodobacter sphaeroides 2.4.1 plasmid A NC_009007.faa NC_009007.out
Rhodobacter sphaeroides 2.4.1 plasmid B NC_007488.faa NC_007488.out
Rhodobacter sphaeroides 2.4.1 plasmid C NC_007489.faa NC_007489.out
Rhodobacter sphaeroides 2.4.1 plasmid D NC_007490.faa NC_007490.out
Rhodobacter sphaeroides 2.4.1 plasmid E NC_009008.faa NC_009008.out
Rhodobacter sphaeroides ATCC 17025 NC_009428.faa NC_009428.out
Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01 NC_009429.faa NC_009429.out
Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA02 NC_009430.faa NC_009430.out
Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA03 NC_009431.faa NC_009431.out
Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA04 NC_009432.faa NC_009432.out
Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA05 NC_009433.faa NC_009433.out
Rhodobacter sphaeroides ATCC 17029 chromosome 1 NC_009049.faa NC_009049.out
Rhodobacter sphaeroides ATCC 17029 chromosome 2 NC_009050.faa NC_009050.out
Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01 NC_009040.faa NC_009040.out
Rhodopseudomonas palustris BisA53 NC_008435.faa NC_008435.out
Rhodopseudomonas palustris BisB5 NC_007958.faa NC_007958.out
Rhodopseudomonas palustris BisB18 NC_007925.faa NC_007925.out
Rhodopseudomonas palustris CGA009 NC_005296.faa NC_005296.out
Rhodopseudomonas palustris CGA009 plasmid pRPA NC_005297.faa NC_005297.out
Rhodopseudomonas palustris HaA2 NC_007778.faa NC_007778.out
Rhodospirillum rubrum ATCC 11170 NC_007643.faa NC_007643.out
Rhodospirillum rubrum ATCC 11170 plasmid unnamed NC_007641.faa NC_007641.out
Rickettsia akari str. Hartford NC_009881.faa NC_009881.out
Rickettsia bellii OSU 85-389 NC_009883.faa NC_009883.out
Rickettsia bellii RML369-C NC_007940.faa NC_007940.out
Rickettsia canadensis str. McKiel NC_009879.faa NC_009879.out
Rickettsia conorii Malish 7 NC_003103.faa NC_003103.out
Rickettsia felis URRWXCal2 NC_007109.faa NC_007109.out
Rickettsia felis URRWXCal2 plasmid pRF NC_007110.faa NC_007110.out
Rickettsia felis URRWXCal2 plasmid pRFdelta NC_007111.faa NC_007111.out
Rickettsia massiliae MTU5 NC_009900.faa NC_009900.out
Rickettsia massiliae MTU5 plasmid pRMA NC_009897.faa NC_009897.out
Rickettsia prowazekii Madrid E NC_000963.faa NC_000963.out
Rickettsia rickettsii str. 'Sheila Smith' NC_009882.faa NC_009882.out
Rickettsia typhi Wilmington NC_006142.faa NC_006142.out
Roseobacter denitrificans OCh 114 NC_008209.faa NC_008209.out
Roseobacter denitrificans plasmid pTB1 NC_008386.faa NC_008386.out
Roseobacter denitrificans plasmid pTB2 NC_008387.faa NC_008387.out
Roseobacter denitrificans plasmid pTB3 NC_008388.faa NC_008388.out
Roseobacter denitrificans plasmid pTB4 NC_008389.faa NC_008389.out
Silicibacter sp. TM1040 NC_008044.faa NC_008044.out
Silicibacter sp. TM1040 plasmid unnamed NC_008042.faa NC_008042.out
Silicibacter sp. TM1040 mega plasmid NC_008043.faa NC_008043.out
Silicibacter pomeroyi DSS-3 NC_003911.faa NC_003911.out
Silicibacter pomeroyi DSS-3 megaplasmid NC_006569.faa NC_006569.out
Sinorhizobium medicae WSM419 NC_009636.faa NC_009636.out
Sinorhizobium medicae WSM419 plasmid pSMED01 NC_009620.faa NC_009620.out
Sinorhizobium medicae WSM419 plasmid pSMED02 NC_009621.faa NC_009621.out
Sinorhizobium medicae WSM419 plasmid pSMED03 NC_009622.faa NC_009622.out
Sinorhizobium meliloti 1021 NC_003047.faa NC_003047.out
Sinorhizobium meliloti 1021 plasmid pSymA NC_003037.faa NC_003037.out
Sinorhizobium meliloti 1021 plasmid pSymB NC_003078.faa NC_003078.out
Sphingomonas wittichii RW1 NC_009511.faa NC_009511.out
Sphingomonas wittichii RW1 plasmid pSWIT01 NC_009507.faa NC_009507.out
Sphingomonas wittichii RW1 plasmid pSWIT02 NC_009508.faa NC_009508.out
Sphingopyxis alaskensis RB2256 NC_008048.faa NC_008048.out
Sphingopyxis alaskensis RB2256 F plasmid NC_008036.faa NC_008036.out
Wolbachia endosymbiont of Brugia malayi TRS NC_006833.faa NC_006833.out
Wolbachia endosymbiont of Drosophila melanogaster NC_002978.faa NC_002978.out
Xanthobacter autotrophicus Py2 NC_009720.faa NC_009720.out
Xanthobacter autotrophicus Py2 plasmid pXAUT01 NC_009717.faa NC_009717.out
Zymomonas mobilis subsp. mobilis ZM4 NC_006526.faa NC_006526.out
Betaproteobacteria
Acidovorax avenae subsp. citrulli AAC00-1 NC_008752.faa NC_008752.out
Acidovorax sp. JS42 NC_008782.faa NC_008782.out
Acidovorax sp. JS42 plasmid pAOVO01 NC_008765.faa NC_008765.out
Acidovorax sp. JS42 plasmid pAOVO02 NC_008766.faa NC_008766.out
Azoarcus sp. BH72 NC_008702.faa NC_008702.out
Azoarcus sp. EbN1 NC_006513.faa NC_006513.out
Azoarcus sp. EbN1 plasmid 1 NC_006823.faa NC_006823.out
Azoarcus sp. EbN1 plasmid 2 NC_006824.faa NC_006824.out
Bordetella bronchiseptica RB50 NC_002927.faa NC_002927.out
Bordetella parapertussis 12822 NC_002928.faa NC_002928.out
Bordetella pertussis Tohama 1 NC_002929.faa NC_002929.out
Burkholderia cenocepacia AU 1054 chromosome 1 NC_008060.faa NC_008060.out
Burkholderia cenocepacia AU 1054 chromosome 2 NC_008061.faa NC_008061.out
Burkholderia cenocepacia AU 1054 chromosome 3 NC_008062.faa NC_008062.out
Burkholderia cenocepacia HI2424 chromosome 1 NC_008542.faa NC_008542.out
Burkholderia cenocepacia HI2424 chromosome 2 NC_008543.faa NC_008543.out
Burkholderia cenocepacia HI2424 chromosome 3 NC_008544.faa NC_008544.out
Burkholderia cenocepacia HI2424 plasmid 1 NC_008545.faa NC_008545.out
Burkholderia sp. 383 chromosome 1 NC_007510.faa NC_007510.out
Burkholderia sp. 383 chromosome 2 NC_007511.faa NC_007511.out
Burkholderia sp. 383 chromosome 3 NC_007509.faa NC_007509.out
Burkholderia cepacia AMMD chromosome 1 NC_008390.faa NC_008390.out
Burkholderia cepacia AMMD chromosome 2 NC_008391.faa NC_008391.out
Burkholderia cepacia AMMD chromosome 3 NC_008392.faa NC_008392.out
Burkholderia cepacia AMMD plasmid 1 NC_008385.faa NC_008385.out
Burkholderia mallei ATCC 23344 chromosome 1 NC_006348.faa NC_006348.out
Burkholderia mallei ATCC 23344 chromosome 2 NC_006349.faa NC_006349.out
Burkholderia mallei NCTC 10229 chromosome I NC_008836.faa NC_008836.out
Burkholderia mallei NCTC 10229 chromosome II NC_008835.faa NC_008835.out
Burkholderia mallei NCTC 10247 chromosome I NC_009080.faa NC_009080.out
Burkholderia mallei NCTC 10247 chromosome II NC_009079.faa NC_009079.out
Burkholderia mallei SAVP1 chromosome I NC_008785.faa NC_008785.out
Burkholderia mallei SAVP1 chromosome I NC_008784.faa NC_008784.out
Burkholderia pseudomallei 1106a chromosome I NC_009076.faa NC_009076.out
Burkholderia pseudomallei 1106a chromosome II NC_009078.faa NC_009078.out
Burkholderia pseudomallei 668 chromosome I NC_009074.faa NC_009074.out
Burkholderia pseudomallei 668 chromosome II NC_009075.faa NC_009075.out
Burkholderia pseudomallei 1710b chromosome 1 NC_007434.faa NC_007434.out
Burkholderia pseudomallei 1710b chromosome 2 NC_007435.faa NC_007435.out
Burkholderia pseudomallei K96243 chromosome 1 NC_006350.faa NC_006350.out
Burkholderia pseudomallei K96243 chromosome 2 NC_006351.faa NC_006351.out
Burkholderia sp. 383 chromosome 1 NC_007510.faa NC_007510.out
Burkholderia sp. 383 chromosome 2 NC_007511.faa NC_007511.out
Burkholderia sp. 383 chromosome 3 NC_007509.faa NC_007509.out
Burkholderia thailandensis E264 chromosome 1 NC_007651.faa NC_007651.out
Burkholderia thailandensis E264 chromosome 2 NC_007650.faa NC_007650.out
Burkholderia vietnamiensis G4 chromosome 1 NC_009256.faa NC_009256.out
Burkholderia vietnamiensis G4 chromosome 2 NC_009255.faa NC_009255.out
Burkholderia vietnamiensis G4 chromosome 3 NC_009254.faa NC_009254.out
Burkholderia vietnamiensis G4 plasmid pBVIE01 NC_009230.faa NC_009230.out
Burkholderia vietnamiensis G4 plasmid pBVIE02 NC_009227.faa NC_009227.out
Burkholderia vietnamiensis G4 plasmid pBVIE03 NC_009229.faa NC_009229.out
Burkholderia vietnamiensis G4 plasmid pBVIE04 NC_009228.faa NC_009228.out
Burkholderia vietnamiensis G4 plasmid pBVIE05 NC_009226.faa NC_009226.out
Burkholderia xenovorans LB400 chromosome 1 NC_007951.faa NC_007951.out
Burkholderia xenovorans LB400 chromosome 2 NC_007952.faa NC_007952.out
Burkholderia xenovorans LB400 chromosome 3 NC_007953.faa NC_007953.out
Chromobacterium violaceum ATCC 12472 NC_005085.faa NC_005085.out
Dechloromonas aromatica RCB NC_007298.faa NC_007298.out
Herminiimonas arsenicoxydans NC_009138.faa NC_009138.out
Janthinobacterium sp. Marseille NC_009659.faa NC_009659.out
Methylibium petroleiphilum PM1 NC_008825.faa NC_008825.out
Methylibium petroleiphilum PM1 plasmid RPME01 NC_008826.faa NC_008826.out
Methylobacillus flagellatus KT NC_007947.faa NC_007947.out
Neisseria gonorrhoeae FA 1090 NC_002946.faa NC_002946.out
Neisseria meningitidis FAM18 NC_008767.faa NC_008767.out
Neisseria meningitidis MC58 NC_003112.faa NC_003112.out
Neisseria meningitidis Z2491 NC_003116.faa NC_003116.out
Nitrosomonas europaea ATCC 19718 NC_004757.faa NC_004757.out
Nitrosomonas eutropha C91 NC_008344.faa NC_008344.out
Nitrosomonas eutropha C91 plasmid1 NC_008341.faa NC_008341.out
Nitrosomonas eutropha C91 plasmid2 NC_008342.faa NC_008342.out
Nitrosospira multiformis ATCC 25196 NC_007614.faa NC_007614.out
Nitrosospira multiformis ATCC 25196 plasmid 1 NC_007615.faa NC_007615.out
Nitrosospira multiformis ATCC 25196 plasmid 2 NC_007616.faa NC_007616.out
Nitrosospira multiformis ATCC 25196 plasmid 3 NC_007617.faa NC_007617.out
Polaromonas naphthalenivorans CJ2 NC_008781.faa NC_008781.out
Polaromonas naphthalenivorans CJ2 plasmid pPNAP01 NC_008757.faa NC_008757.out
Polaromonas naphthalenivorans CJ2 plasmid pPNAP02 NC_008758.faa NC_008758.out
Polaromonas naphthalenivorans CJ2 plasmid pPNAP03 NC_008759.faa NC_008759.out
Polaromonas naphthalenivorans CJ2 plasmid pPNAP04 NC_008760.faa NC_008760.out
Polaromonas naphthalenivorans CJ2 plasmid pPNAP05 NC_008761.faa NC_008761.out