PSORTb v.2.0 Precomputed Genomes

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Precomputed Genomes - PSORTb v.2.0

Note: a new version of PSORTdb is now available containing more up-to-date precomputed results of bacterial AND archaeal genomes by the new PSORTb v.3 as well as PSORTb v.2. This page is available for archival purposes only and will no longer be updated.

The following bacterial chromsome RefSeqs from NCBI's Genome database have been analyzed using PSORTb version 2.0. Two files are available for each genome - the inputted FASTA file (accession.faa) and the outputted PSORTb results in tab-delimited text format (accession.out). The tab delimited text file can easily be imported into your favourite spreadsheet or database program. The old precomputed genomes page, using PSORT-B v.1.1.2, is available here.

The same information can be also browsed at PSORTdb, a database containing both proteins of experimentally verified localization as well as predictions of localization for sequenced bacterial genomes. PSORTdb contains predictions and associated information for all of the genomes below generated with both PSORTb v.1.1.2 and 2.0. The data can be searched, browsed, BLASTed against and downloaded in a variety of combinations, making queries such as "show all Gram-negative cytoplasmic proteins" or "show all P. aeruginosa proteins with a predicted signal peptide" possible. Click here to visit PSORTdb.

If you have a favourite genome you'd like to see analyzed, contact us!


Gram-negative bacterial chromosomes:
Organism (listed by phylum/class)	Input	PSORTb Output
Acidobacteria
Acidobacteria bacterium Ellin345	NC_008009.faa	NC_008009.out
Solibacter usitatus Ellin6076	NC_008536.faa	NC_008536.out
Alphaproteobacteria
Acidiphilium cryptum JF-5	NC_009484.faa	NC_009484.out
Acidiphilium cryptum JF-5 plasmid pACRY01	NC_009467.faa	NC_009467.out
Acidiphilium cryptum JF-5 plasmid pACRY02	NC_009468.faa	NC_009468.out
Acidiphilium cryptum JF-5 plasmid pACRY03	NC_009469.faa	NC_009469.out
Acidiphilium cryptum JF-5 plasmid pACRY04	NC_009470.faa	NC_009470.out
Acidiphilium cryptum JF-5 plasmid pACRY05	NC_009471.faa	NC_009471.out
Acidiphilium cryptum JF-5 plasmid pACRY06	NC_009472.faa	NC_009472.out
Acidiphilium cryptum JF-5 plasmid pACRY07	NC_009473.faa	NC_009473.out
Acidiphilium cryptum JF-5 plasmid pACRY08	NC_009474.faa	NC_009474.out
Agrobacterium tumefaciens C58 (U. Washington) circular chromosome	NC_003304.faa	NC_003304.out
Agrobacterium tumefaciens C58 (U. Washington) linear chromosome	NC_003305.faa	NC_003305.out
Agrobacterium tumefaciens str. C58 plasmid AT (U. Washington)	NC_003306.faa	NC_003306.out
Agrobacterium tumefaciens str. C58 plasmid Ti (U. Washington)	NC_003308.faa	NC_003308.out
Agrobacterium tumefaciens C58 (Cereon) circular chromosome	NC_003062.faa	NC_003062.out
Agrobacterium tumefaciens C58 (Cereon) linear chromosome	NC_003063.faa	NC_003063.out
Agrobacterium tumefaciens str. C58 plasmid AT (Cereon)	NC_003064.faa	NC_003064.out
Agrobacterium tumefaciens str. C58 plasmid Ti (Cereon)	NC_003065.faa	NC_003065.out
Anaplasma marginale St. Maries	NC_004842.faa	NC_004842.out
Anaplasma phagocytophilum HZ	NC_007797.faa	NC_007797.out
Azorhizobium caulinodans ORS 571	NC_009937.faa	NC_009937.out
Bartonella bacilliformis KC583	NC_008783.faa	NC_008783.out
Bartonella henselae Houston-1	NC_005956.faa	NC_005956.out
Bartonella quintana Toulouse	NC_005955.faa	NC_005955.out
Bradyrhizobium sp. BTAi1	NC_009485.faa	NC_009485.out
Bradyrhizobium sp. BTAi1 plasmid pBBta01	NC_009475.faa	NC_009475.out
Bradyrhizobium sp. ORS278	NC_009445.faa	NC_009445.out
Bradyrhizobium japonicum USDA 110	NC_004463.faa	NC_004463.out
Brucella abortus biovar 1 str. 9-941 chromosome 1	NC_006932.faa	NC_006932.out
Brucella abortus biovar 1 str. 9-941 chromosome 2	NC_006933.faa	NC_006933.out
Brucella melitensis 16M chromosome 1	NC_003317.faa	NC_003317.out
Brucella melitensis 16M chromosome 2	NC_003318.faa	NC_003318.out
Brucella melitensis biovar Abortus 2308 chromosome 1	NC_007618.faa	NC_007618.out
Brucella melitensis biovar Abortus 2308 chromosome 2	NC_007624.faa	NC_007624.out
Brucella ovis ATCC 25840 chromosome I	NC_009505.faa	NC_009505.out
Brucella ovis ATCC 25840 chromosome II	NC_009504.faa	NC_009504.out
Brucella suis 1330 chromosome 1	NC_004310.faa	NC_004310.out
Brucella suis 1330 chromosome 2	NC_004311.faa	NC_004311.out
Candidatus Pelagibacter ubique HTCC1062	NC_007205.faa	NC_007205.out
Caulobacter crescentus CB15	NC_002696.faa	NC_002696.out
Ehrlichia canis str. Jake	NC_007354.faa	NC_007354.out
Ehrlichia chaffeensis str. Arkansas	NC_007799.faa	NC_007799.out
Ehrlichia ruminantium Gardel	NC_006831.faa	NC_006831.out
Ehrlichia ruminantium Welgevonden (CIRAD)	NC_006832.faa	NC_006832.out
Ehrlichia ruminantium Welgevonden (U. Pretoria)	NC_005295.faa	NC_005295.out
Erythrobacter litoralis HTCC2594	NC_007722.faa	NC_007722.out
Gluconobacter oxydans 621H	NC_006677.faa	NC_006677.out
Gluconobacter oxydans 621H plasmid pGOX1	NC_006672.faa	NC_006672.out
Gluconobacter oxydans 621H plasmid pGOX2	NC_006673.faa	NC_006673.out
Gluconobacter oxydans 621H plasmid pGOX3	NC_006674.faa	NC_006674.out
Gluconobacter oxydans 621H plasmid pGOX4	NC_006675.faa	NC_006675.out
Gluconobacter oxydans 621H plasmid pGOX5	NC_006676.faa	NC_006676.out
Granulibacter bethesdensis CGDNIH1	NC_008343.faa	NC_008343.out
Hyphomonas neptunium ATCC 15444	NC_008358.faa	NC_008358.out
Jannaschia sp. CCS1	NC_007802.faa	NC_007802.out
Jannaschia sp. CCS1 plasmid1	NC_007801.faa	NC_007801.out
Magnetospirillum magneticum AMB-1	NC_007626.faa	NC_007626.out
Maricaulis maris MCS10	NC_008347.faa	NC_008347.out
Mesorhizobium sp. BNC1	NC_008254.faa	NC_008254.out
Mesorhizobium sp. BNC1 plasmid 1	NC_008242.faa	NC_008242.out
Mesorhizobium sp. BNC1 plasmid 2	NC_008243.faa	NC_008243.out
Mesorhizobium sp. BNC1 plasmid 3	NC_008244.faa	NC_008244.out
Mesorhizobium loti MAFF 303099	NC_002678.faa	NC_002678.out
Mesorhizobium loti MAFF303099 plasmid pMLa	NC_002679.faa	NC_002679.out
Mesorhizobium loti MAFF303099 plasmid pMLb	NC_002682.faa	NC_002682.out
Neorickettsia sennetsu str. Miyayama	NC_007798.faa	NC_007798.out
Nitrobacter hamburgensis X14	NC_007964.faa	NC_007964.out
Nitrobacter hamburgensis X14 plasmid 1	NC_007959.faa	NC_007959.out
Nitrobacter hamburgensis X14 plasmid 2	NC_007960.faa	NC_007960.out
Nitrobacter hamburgensis X14 plasmid 3	NC_007961.faa	NC_007961.out
Nitrobacter winogradskyi Nb-255	NC_007406.faa	NC_007406.out
Novosphingobium aromaticivorans DSM 12444	NC_007794.faa	NC_007794.out
Novosphingobium aromaticivorans DSM 12444 plasmid pNL1	NC_009426.faa	NC_009426.out
Novosphingobium aromaticivorans DSM 12444 plasmid pNL2	NC_009427.faa	NC_009427.out
Ochrobactrum anthropi ATCC 49188 chromosome 1	NC_009667.faa	NC_009667.out
Ochrobactrum anthropi ATCC 49188 chromosome 2	NC_009668.faa	NC_009668.out
Ochrobactrum anthropi ATCC 49188 plasmid pOANT01	NC_009669.faa	NC_009669.out
Ochrobactrum anthropi ATCC 49188 plasmid pOANT02	NC_009670.faa	NC_009670.out
Ochrobactrum anthropi ATCC 49188 plasmid pOANT03	NC_009671.faa	NC_009671.out
Ochrobactrum anthropi ATCC 49188 plasmid pOANT04	NC_009672.faa	NC_009672.out
Orientia tsutsugamushi Boryong	NC_009488.faa	NC_009488.out
Paracoccus denitrificans PD1222 chromosome 1	NC_008686.faa	NC_008686.out
Paracoccus denitrificans PD1222 chromosome 2	NC_008687.faa	NC_008687.out
Paracoccus denitrificans PD1222 plasmid 1	NC_008688.faa	NC_008688.out
Parvibaculum lavamentivorans DS-1	NC_009719.faa	NC_009719.out
Rhizobium etli CFN 42	NC_007761.faa	NC_007761.out
Rhizobium etli CFN 42 plasmid p42a	NC_007762.faa	NC_007762.out
Rhizobium etli CFN 42 plasmid p42b	NC_007763.faa	NC_007763.out
Rhizobium etli CFN 42 plasmid p42c	NC_007764.faa	NC_007764.out
Rhizobium etli CFN 42 plasmid p42e	NC_007765.faa	NC_007765.out
Rhizobium etli CFN 42 plasmid p42f	NC_007766.faa	NC_007766.out
Rhizobium etli CFN 42 symbiotic plasmid p42d	NC_004041.faa	NC_004041.out
Rhizobium leguminosarum bv. viciae 3841	NC_008380.faa	NC_008380.out
Rhizobium leguminosarum bv. viciae 3841 plasmid pRL7	NC_008382.faa	NC_008382.out
Rhizobium leguminosarum bv. viciae 3841 plasmid pRL8	NC_008383.faa	NC_008383.out
Rhizobium leguminosarum bv. viciae 3841 plasmid pRL9	NC_008379.faa	NC_008379.out
Rhizobium leguminosarum bv. viciae 3841 plasmid pRL10	NC_008381.faa	NC_008381.out
Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11	NC_008384.faa	NC_008384.out
Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12	NC_008378.faa	NC_008378.out
Rhodobacter sphaeroides 2.4.1 chromosome 1	NC_007493.faa	NC_007493.out
Rhodobacter sphaeroides 2.4.1 chromosome 2	NC_007494.faa	NC_007494.out
Rhodobacter sphaeroides 2.4.1 plasmid A	NC_009007.faa	NC_009007.out
Rhodobacter sphaeroides 2.4.1 plasmid B	NC_007488.faa	NC_007488.out
Rhodobacter sphaeroides 2.4.1 plasmid C	NC_007489.faa	NC_007489.out
Rhodobacter sphaeroides 2.4.1 plasmid D	NC_007490.faa	NC_007490.out
Rhodobacter sphaeroides 2.4.1 plasmid E	NC_009008.faa	NC_009008.out
Rhodobacter sphaeroides ATCC 17025	NC_009428.faa	NC_009428.out
Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01	NC_009429.faa	NC_009429.out
Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA02	NC_009430.faa	NC_009430.out
Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA03	NC_009431.faa	NC_009431.out
Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA04	NC_009432.faa	NC_009432.out
Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA05	NC_009433.faa	NC_009433.out
Rhodobacter sphaeroides ATCC 17029 chromosome 1	NC_009049.faa	NC_009049.out
Rhodobacter sphaeroides ATCC 17029 chromosome 2	NC_009050.faa	NC_009050.out
Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01	NC_009040.faa	NC_009040.out
Rhodopseudomonas palustris BisA53	NC_008435.faa	NC_008435.out
Rhodopseudomonas palustris BisB5	NC_007958.faa	NC_007958.out
Rhodopseudomonas palustris BisB18	NC_007925.faa	NC_007925.out
Rhodopseudomonas palustris CGA009	NC_005296.faa	NC_005296.out
Rhodopseudomonas palustris CGA009 plasmid pRPA	NC_005297.faa	NC_005297.out
Rhodopseudomonas palustris HaA2	NC_007778.faa	NC_007778.out
Rhodospirillum rubrum ATCC 11170	NC_007643.faa	NC_007643.out
Rhodospirillum rubrum ATCC 11170 plasmid unnamed	NC_007641.faa	NC_007641.out
Rickettsia akari str. Hartford	NC_009881.faa	NC_009881.out
Rickettsia bellii OSU 85-389	NC_009883.faa	NC_009883.out
Rickettsia bellii RML369-C	NC_007940.faa	NC_007940.out
Rickettsia canadensis str. McKiel	NC_009879.faa	NC_009879.out
Rickettsia conorii Malish 7	NC_003103.faa	NC_003103.out
Rickettsia felis URRWXCal2	NC_007109.faa	NC_007109.out
Rickettsia felis URRWXCal2 plasmid pRF	NC_007110.faa	NC_007110.out
Rickettsia felis URRWXCal2 plasmid pRFdelta	NC_007111.faa	NC_007111.out
Rickettsia massiliae MTU5	NC_009900.faa	NC_009900.out
Rickettsia massiliae MTU5 plasmid pRMA	NC_009897.faa	NC_009897.out
Rickettsia prowazekii Madrid E	NC_000963.faa	NC_000963.out
Rickettsia rickettsii str. 'Sheila Smith'	NC_009882.faa	NC_009882.out
Rickettsia typhi Wilmington	NC_006142.faa	NC_006142.out
Roseobacter denitrificans OCh 114	NC_008209.faa	NC_008209.out
Roseobacter denitrificans plasmid pTB1	NC_008386.faa	NC_008386.out
Roseobacter denitrificans plasmid pTB2	NC_008387.faa	NC_008387.out
Roseobacter denitrificans plasmid pTB3	NC_008388.faa	NC_008388.out
Roseobacter denitrificans plasmid pTB4	NC_008389.faa	NC_008389.out
Silicibacter sp. TM1040	NC_008044.faa	NC_008044.out
Silicibacter sp. TM1040 plasmid unnamed	NC_008042.faa	NC_008042.out
Silicibacter sp. TM1040 mega plasmid	NC_008043.faa	NC_008043.out
Silicibacter pomeroyi DSS-3	NC_003911.faa	NC_003911.out
Silicibacter pomeroyi DSS-3 megaplasmid	NC_006569.faa	NC_006569.out
Sinorhizobium medicae WSM419	NC_009636.faa	NC_009636.out
Sinorhizobium medicae WSM419 plasmid pSMED01	NC_009620.faa	NC_009620.out
Sinorhizobium medicae WSM419 plasmid pSMED02	NC_009621.faa	NC_009621.out
Sinorhizobium medicae WSM419 plasmid pSMED03	NC_009622.faa	NC_009622.out
Sinorhizobium meliloti 1021	NC_003047.faa	NC_003047.out
Sinorhizobium meliloti 1021 plasmid pSymA	NC_003037.faa	NC_003037.out
Sinorhizobium meliloti 1021 plasmid pSymB	NC_003078.faa	NC_003078.out
Sphingomonas wittichii RW1	NC_009511.faa	NC_009511.out
Sphingomonas wittichii RW1 plasmid pSWIT01	NC_009507.faa	NC_009507.out
Sphingomonas wittichii RW1 plasmid pSWIT02	NC_009508.faa	NC_009508.out
Sphingopyxis alaskensis RB2256	NC_008048.faa	NC_008048.out
Sphingopyxis alaskensis RB2256 F plasmid	NC_008036.faa	NC_008036.out
Wolbachia endosymbiont of Brugia malayi TRS	NC_006833.faa	NC_006833.out
Wolbachia endosymbiont of Drosophila melanogaster	NC_002978.faa	NC_002978.out
Xanthobacter autotrophicus Py2	NC_009720.faa	NC_009720.out
Xanthobacter autotrophicus Py2 plasmid pXAUT01	NC_009717.faa	NC_009717.out
Zymomonas mobilis subsp. mobilis ZM4	NC_006526.faa	NC_006526.out
Betaproteobacteria
Acidovorax avenae subsp. citrulli AAC00-1	NC_008752.faa	NC_008752.out
Acidovorax sp. JS42	NC_008782.faa	NC_008782.out
Acidovorax sp. JS42 plasmid pAOVO01	NC_008765.faa	NC_008765.out
Acidovorax sp. JS42 plasmid pAOVO02	NC_008766.faa	NC_008766.out
Azoarcus sp. BH72	NC_008702.faa	NC_008702.out
Azoarcus sp. EbN1	NC_006513.faa	NC_006513.out
Azoarcus sp. EbN1 plasmid 1	NC_006823.faa	NC_006823.out
Azoarcus sp. EbN1 plasmid 2	NC_006824.faa	NC_006824.out
Bordetella bronchiseptica RB50	NC_002927.faa	NC_002927.out
Bordetella parapertussis 12822	NC_002928.faa	NC_002928.out
Bordetella pertussis Tohama 1	NC_002929.faa	NC_002929.out
Burkholderia cenocepacia AU 1054 chromosome 1	NC_008060.faa	NC_008060.out
Burkholderia cenocepacia AU 1054 chromosome 2	NC_008061.faa	NC_008061.out
Burkholderia cenocepacia AU 1054 chromosome 3	NC_008062.faa	NC_008062.out
Burkholderia cenocepacia HI2424 chromosome 1	NC_008542.faa	NC_008542.out
Burkholderia cenocepacia HI2424 chromosome 2	NC_008543.faa	NC_008543.out
Burkholderia cenocepacia HI2424 chromosome 3	NC_008544.faa	NC_008544.out
Burkholderia cenocepacia HI2424 plasmid 1	NC_008545.faa	NC_008545.out
Burkholderia sp. 383 chromosome 1	NC_007510.faa	NC_007510.out
Burkholderia sp. 383 chromosome 2	NC_007511.faa	NC_007511.out
Burkholderia sp. 383 chromosome 3	NC_007509.faa	NC_007509.out
Burkholderia cepacia AMMD chromosome 1	NC_008390.faa	NC_008390.out
Burkholderia cepacia AMMD chromosome 2	NC_008391.faa	NC_008391.out
Burkholderia cepacia AMMD chromosome 3	NC_008392.faa	NC_008392.out
Burkholderia cepacia AMMD plasmid 1	NC_008385.faa	NC_008385.out
Burkholderia mallei ATCC 23344 chromosome 1	NC_006348.faa	NC_006348.out
Burkholderia mallei ATCC 23344 chromosome 2	NC_006349.faa	NC_006349.out
Burkholderia mallei NCTC 10229 chromosome I	NC_008836.faa	NC_008836.out
Burkholderia mallei NCTC 10229 chromosome II	NC_008835.faa	NC_008835.out
Burkholderia mallei NCTC 10247 chromosome I	NC_009080.faa	NC_009080.out
Burkholderia mallei NCTC 10247 chromosome II	NC_009079.faa	NC_009079.out
Burkholderia mallei SAVP1 chromosome I	NC_008785.faa	NC_008785.out
Burkholderia mallei SAVP1 chromosome I	NC_008784.faa	NC_008784.out
Burkholderia pseudomallei 1106a chromosome I	NC_009076.faa	NC_009076.out
Burkholderia pseudomallei 1106a chromosome II	NC_009078.faa	NC_009078.out
Burkholderia pseudomallei 668 chromosome I	NC_009074.faa	NC_009074.out
Burkholderia pseudomallei 668 chromosome II	NC_009075.faa	NC_009075.out
Burkholderia pseudomallei 1710b chromosome 1	NC_007434.faa	NC_007434.out
Burkholderia pseudomallei 1710b chromosome 2	NC_007435.faa	NC_007435.out
Burkholderia pseudomallei K96243 chromosome 1	NC_006350.faa	NC_006350.out
Burkholderia pseudomallei K96243 chromosome 2	NC_006351.faa	NC_006351.out
Burkholderia sp. 383 chromosome 1	NC_007510.faa	NC_007510.out
Burkholderia sp. 383 chromosome 2	NC_007511.faa	NC_007511.out
Burkholderia sp. 383 chromosome 3	NC_007509.faa	NC_007509.out
Burkholderia thailandensis E264 chromosome 1	NC_007651.faa	NC_007651.out
Burkholderia thailandensis E264 chromosome 2	NC_007650.faa	NC_007650.out
Burkholderia vietnamiensis G4 chromosome 1	NC_009256.faa	NC_009256.out
Burkholderia vietnamiensis G4 chromosome 2	NC_009255.faa	NC_009255.out
Burkholderia vietnamiensis G4 chromosome 3	NC_009254.faa	NC_009254.out
Burkholderia vietnamiensis G4 plasmid pBVIE01	NC_009230.faa	NC_009230.out
Burkholderia vietnamiensis G4 plasmid pBVIE02	NC_009227.faa	NC_009227.out
Burkholderia vietnamiensis G4 plasmid pBVIE03	NC_009229.faa	NC_009229.out
Burkholderia vietnamiensis G4 plasmid pBVIE04	NC_009228.faa	NC_009228.out
Burkholderia vietnamiensis G4 plasmid pBVIE05	NC_009226.faa	NC_009226.out
Burkholderia xenovorans LB400 chromosome 1	NC_007951.faa	NC_007951.out
Burkholderia xenovorans LB400 chromosome 2	NC_007952.faa	NC_007952.out
Burkholderia xenovorans LB400 chromosome 3	NC_007953.faa	NC_007953.out
Chromobacterium violaceum ATCC 12472	NC_005085.faa	NC_005085.out
Dechloromonas aromatica RCB	NC_007298.faa	NC_007298.out
Herminiimonas arsenicoxydans	NC_009138.faa	NC_009138.out
Janthinobacterium sp. Marseille	NC_009659.faa	NC_009659.out
Methylibium petroleiphilum PM1	NC_008825.faa	NC_008825.out
Methylibium petroleiphilum PM1 plasmid RPME01	NC_008826.faa	NC_008826.out
Methylobacillus flagellatus KT	NC_007947.faa	NC_007947.out
Neisseria gonorrhoeae FA 1090	NC_002946.faa	NC_002946.out
Neisseria meningitidis FAM18	NC_008767.faa	NC_008767.out
Neisseria meningitidis MC58	NC_003112.faa	NC_003112.out
Neisseria meningitidis Z2491	NC_003116.faa	NC_003116.out
Nitrosomonas europaea ATCC 19718	NC_004757.faa	NC_004757.out
Nitrosomonas eutropha C91	NC_008344.faa	NC_008344.out
Nitrosomonas eutropha C91 plasmid1	NC_008341.faa	NC_008341.out
Nitrosomonas eutropha C91 plasmid2	NC_008342.faa	NC_008342.out
Nitrosospira multiformis ATCC 25196	NC_007614.faa	NC_007614.out
Nitrosospira multiformis ATCC 25196 plasmid 1	NC_007615.faa	NC_007615.out
Nitrosospira multiformis ATCC 25196 plasmid 2	NC_007616.faa	NC_007616.out
Nitrosospira multiformis ATCC 25196 plasmid 3	NC_007617.faa	NC_007617.out
Polaromonas naphthalenivorans CJ2	NC_008781.faa	NC_008781.out
Polaromonas naphthalenivorans CJ2 plasmid pPNAP01	NC_008757.faa	NC_008757.out
Polaromonas naphthalenivorans CJ2 plasmid pPNAP02	NC_008758.faa	NC_008758.out
Polaromonas naphthalenivorans CJ2 plasmid pPNAP03	NC_008759.faa	NC_008759.out
Polaromonas naphthalenivorans CJ2 plasmid pPNAP04	NC_008760.faa	NC_008760.out
Polaromonas naphthalenivorans CJ2 plasmid pPNAP05	NC_008761.faa	NC_008761.out
Polaromonas naphthalenivorans CJ2 plasmid pPNAP06	NC_008762.faa	NC_008762.out
Polaromonas naphthalenivorans CJ2 plasmid pPNAP07	NC_008763.faa	NC_008763.out
Polaromonas naphthalenivorans CJ2 plasmid pPNAP08	NC_008764.faa	NC_008764.out
Polaromonas sp. JS666	NC_007948.faa	NC_007948.out
Polaromonas sp. JS666 plasmid 1	NC_007949.faa	NC_007949.out
Polaromonas sp. JS666 plasmid 2	NC_007950.faa	NC_007950.out
Polynucleobacter sp. QLW-P1DMWA-1	NC_009379.faa	NC_009379.out
Ralstonia eutropha H16 chromosome 1	NC_008313.faa	NC_008313.out
Ralstonia eutropha H16 chromosome 2	NC_008314.faa	NC_008314.out
Ralstonia eutropha JMP134 chromosome 1	NC_007347.faa	NC_007347.out
Ralstonia eutropha JMP134 chromosome 2	NC_007348.faa	NC_007348.out
Ralstonia eutropha JMP134 megaplasmid	NC_007336.faa	NC_007336.out
Ralstonia eutropha JMP134 plasmid 1	NC_007337.faa	NC_007337.out
Ralstonia metallidurans CH34 chromosome 1	NC_007973.faa	NC_007973.out
Ralstonia metallidurans CH34 chromosome 2	NC_007974.faa	NC_007974.out
Ralstonia metallidurans CH34 plasmid 1	NC_007971.faa	NC_007971.out
Ralstonia metallidurans CH34 plasmid 2	NC_007972.faa	NC_007972.out
Ralstonia solanacearum GMI 1000	NC_003295.faa	NC_003295.out
Ralstonia solanacearum GMI1000 plasmid pGMI1000MP	NC_003296.faa	NC_003296.out
Rhodoferax ferrireducens DSM 15236	NC_007908.faa	NC_007908.out
Rhodoferax ferrireducens DSM 15236 plasmid1	NC_007901.faa	NC_007901.out
Thiobacillus denitrificans ATCC 25259	NC_007404.faa	NC_007404.out
Verminephrobacter eiseniae EF01-2	NC_008786.faa	NC_008786.out
Verminephrobacter eiseniae EF01-2 plasmid pVEIS01	NC_008771.faa	NC_008771.out
Deltaproteobacteria
Anaeromyxobacter dehalogenans 2CP-C	NC_007760.faa	NC_007760.out
Anaeromyxobacter sp. Fw109-5	NC_009675.faa	NC_009675.out
Bdellovibrio bacteriovorus HD100	NC_005363.faa	NC_005363.out
Desulfotalea psychrophilia LSv54	NC_006138.faa	NC_006138.out
Desulfotalea psychrophila LSv54 plasmid large	NC_006139.faa	NC_006139.out
Desulfotalea psychrophila LSv54 plasmid small	NC_006140.faa	NC_006140.out
Desulfovibrio desulfuricans G20	NC_007519.faa	NC_007519.out
Desulfovibrio vulgaris subsp. vulgaris DP4	NC_008751.faa	NC_008751.out
Desulfovibrio vulgaris subsp. vulgaris DP4 plasmid pDVUL01	NC_008741.faa	NC_008741.out
Desulfovibrio vulgaris subsp. vulgaris Hildenborough	NC_002937.faa	NC_002937.out
Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough megaplasmid	NC_005863.faa	NC_005863.out
Pelobacter carbinolicus DSM 2380	NC_007498.faa	NC_007498.out
Geobacter metallireducens GS-15	NC_007517.faa	NC_007517.out
Geobacter metallireducens GS-15 plasmid unnamed	NC_007515.faa	NC_007515.out
Geobacter sulfurreducens PCA	NC_002939.faa	NC_002939.out
Geobacter uraniumreducens Rf4	NC_009483.faa	NC_009483.out
Lawsonia intracellularis PHE/MN1-00	NC_008011.faa	NC_008011.out
Lawsonia intracellularis PHE/MN1-00 plasmid 1	NC_008012.faa	NC_008012.out
Lawsonia intracellularis PHE/MN1-00 plasmid 2	NC_008013.faa	NC_008013.out
Lawsonia intracellularis PHE/MN1-00 plasmid 3	NC_008014.faa	NC_008014.out
Myxococcus xanthus DK 1622	NC_008095.faa	NC_008095.out
Pelobacter propionicus DSM 2379	NC_008609.faa	NC_008609.out
Pelobacter propionicus DSM 2379 plasmid pPRO1	NC_008607.faa	NC_008607.out
Pelobacter propionicus DSM 2379 plasmid pPRO2	NC_008608.faa	NC_008608.out
Syntrophobacter fumaroxidans MPOB	NC_008554.faa	NC_008554.out
Syntrophus aciditrophicus SB	NC_007759.faa	NC_007759.out
Epsilonproteobacteria
Arcobacter butzleri RM4018	NC_009850.faa	NC_009850.out
Campylobacter concisus 13826	NC_009802.faa	NC_009802.out
Campylobacter concisus 13826 plasmid pCCON16	NC_009796.faa	NC_009796.out
Campylobacter concisus 13826 plasmid pCCON31	NC_009795.faa	NC_009795.out
Campylobacter curvus 525.92	NC_009715.faa	NC_009715.out
Campylobacter fetus subsp. fetus 82-40	NC_008599.faa	NC_008599.out
Campylobacter hominis ATCC BAA-381	NC_009714.faa	NC_009714.out
Campylobacter hominis ATCC BAA-381 plasmid pCH4	NC_009713.faa	NC_009713.out
Campylobacter jejuni subsp. doylei 269.97	NC_009707.faa	NC_009707.out
Campylobacter jejuni subsp. jejuni 81116	NC_009839.faa	NC_009839.out
Campylobacter jejuni subsp. jejuni 81-176	NC_008787.faa	NC_008787.out
Campylobacter jejuni subsp. jejuni 81-176 plasmid pTet	NC_008790.faa	NC_008790.out
Campylobacter jejuni subsp. jejuni 81-176 plasmid pVir	NC_008770.faa	NC_008770.out
Campylobacter jejuni subsp. jejuni NCTC 11168	NC_002163.faa	NC_002163.out
Campylobacter jejuni RM1221	NC_003912.faa	NC_003912.out
Helicobacter acinonychis str. Sheeba	NC_008229.faa	NC_008229.out
Helicobacter acinonychis str. Sheeba plasmid pHac1	NC_008230.faa	NC_008230.out
Helicobacter hepaticus ATCC 51499	NC_004917.faa	NC_004917.out
Helicobacter pylori 26695	NC_000915.faa	NC_000915.out
Helicobacter pylori HPAG1	NC_008086.faa	NC_008086.out
Helicobacter pylori HPAG1 plasmid pHPAG1	NC_008087.faa	NC_008087.out
Helicobacter pylori J99	NC_000921.faa	NC_000921.out
Nitratiruptor sp. SB155-2	NC_009662.faa	NC_009662.out
Sulfurovum sp. NBC37-1	NC_009663.faa	NC_009663.out
Thiomicrospira denitrificans ATCC 33889	NC_007575.faa	NC_007575.out
Wolinella succinogenes DSM 1740	NC_005090.faa	NC_005090.out
Gammaproteobacteria
Acinetobacter baumannii ATCC 17978	NC_009085.faa	NC_009085.out
Acinetobacter baumannii ATCC 17978 plasmid pAB1	NC_009083.faa	NC_009083.out
Acinetobacter baumannii ATCC 17978 plasmid pAB2	NC_009084.faa	NC_009084.out
Acinetobacter sp. ADP1	NC_005966.faa	NC_005966.out
Actinobacillus pleuropneumoniae L20	NC_009053.faa	NC_009053.out
Actinobacillus succinogenes 130Z	NC_009655.faa	NC_009655.out
Aeromonas hydrophila subsp. hydrophila ATCC 7966	NC_008570.faa	NC_008570.out
Aeromonas salmonicida subsp. salmonicida A449	NC_009348.faa	NC_009348.out
Aeromonas salmonicida subsp. salmonicida A449 plasmid 4	NC_009349.faa	NC_009349.out
Aeromonas salmonicida subsp. salmonicida A449 plasmid 5	NC_009350.faa	NC_009350.out
Alcanivorax borkumensis SK2	NC_008260.faa	NC_008260.out
Alkalilimnicola ehrlichei MLHE-1	NC_008340.faa	NC_008340.out
Baumannia cicadellinicola str. Hc (Homalodisca coagulata)	NC_007984.faa	NC_007984.out
Buchnera aphidicola Bp (Baizongia pistaciae)	NC_004545.faa	NC_004545.out
Buchnera aphidicola str. Bp (Baizongia pistaciae) plasmid pBBp1	NC_004555.faa	NC_004555.out
Buchnera aphidicola Sg (Schizaphis graminum)	NC_004061.faa	NC_004061.out
Buchnera aphidicola APS (Acrythosiphon pisum)	NC_002528.faa	NC_002528.out
Buchnera aphidicola str. APS (Acyrthosiphon pisum) plasmid pLeu	NC_002253.faa	NC_002253.out
Buchnera aphidicola str. APS (Acyrthosiphon pisum) plasmid pTrp	NC_002252.faa	NC_002252.out
Buchnera aphidicola str. Cc (Cinara cedri)	NC_008513.faa	NC_008513.out
Candidatus Blochmannia floridanus	NC_005061.faa	NC_005061.out
Candidatus Blochmannia pennsylvanicus BPEN	NC_007292.faa	NC_007292.out
Candidatus Carsonella ruddii PV	NC_008512.faa	NC_008512.out
Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)	NC_008610.faa	NC_008610.out
Candidatus Vesicomyosocius okutanii HA	NC_009465.faa	NC_009465.out
Chromohalobacter salexigens DSM 3043	NC_007963.faa	NC_007963.out
Citrobacter koseri ATCC BAA-895	NC_009792.faa	NC_009792.out
Citrobacter koseri ATCC BAA-895 plasmid pCKO2	NC_009794.faa	NC_009794.out
Citrobacter koseri ATCC BAA-895 plasmid pCKO3	NC_009793.faa	NC_009793.out
Colwellia psychrerythraea 34H	NC_003910.faa	NC_003910.out
Coxiella burnetii Dugway 7E9-12	NC_009727.faa	NC_009727.out
Coxiella burnetii Dugway 7E9-12 plasmid pQpDG	NC_009726.faa	NC_009726.out
Coxiella burnetii RSA 493	NC_002971.faa	NC_002971.out
Coxiella burnetii RSA 493 plasmid pQpH1	NC_004704.faa	NC_004704.out
Dichelobacter nodosus VCS1703A	NC_009446.faa	NC_009446.out
Enterobacter sakazakii ATCC BAA-894	NC_009778.faa	NC_009778.out
Enterobacter sakazakii ATCC BAA-894 plasmid pESA2	NC_009779.faa	NC_009779.out
Enterobacter sakazakii ATCC BAA-894 plasmid pESA3	NC_009780.faa	NC_009780.out
Enterobacter sp. 638	NC_009436.faa	NC_009436.out
Enterobacter sp. 638 plasmid pENTE01	NC_009425.faa	NC_009425.out
Erwinia carotovora subsp. atroseptica SCRI1043	NC_004547.faa	NC_004547.out
Escherichia coli 536	NC_008253.faa	NC_008253.out
Escherichia coli APEC O1	NC_008563.faa	NC_008563.out
Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM	NC_009837.faa	NC_009837.out
Escherichia coli APEC O1 plasmid pAPEC-O1-R	NC_009838.faa	NC_009838.out
Escherichia coli CFT073	NC_004431.faa	NC_004431.out
Escherichia coli E24377A	NC_009801.faa	NC_009801.out
Escherichia coli E24377A plasmid pETEC_35	NC_009787.faa	NC_009787.out
Escherichia coli E24377A plasmid pETEC_5	NC_009791.faa	NC_009791.out
Escherichia coli E24377A plasmid pETEC_6	NC_009789.faa	NC_009789.out
Escherichia coli E24377A plasmid pETEC_73	NC_009788.faa	NC_009788.out
Escherichia coli E24377A plasmid pETEC_74	NC_009790.faa	NC_009790.out
Escherichia coli E24377A plasmid pETEC_80	NC_009786.faa	NC_009786.out
Escherichia coli HS	NC_009800.faa	NC_009800.out
Escherichia coli K12	NC_000913.faa	NC_000913.out
Escherichia coli O157:H7 str. Sakai	NC_002695.faa	NC_002695.out
Escherichia coli O157:H7 str. Sakai plasmid pO157	NC_002128.faa	NC_002128.out
Escherichia coli O157:H7 str. Sakai plasmid pOSAK1	NC_002127.faa	NC_002127.out
Escherichia coli O157:H7 EDL933	NC_002655.faa	NC_002655.out
Escherichia coli O157:H7 EDL933 plasmid pO157	NC_007414.faa	NC_007414.out
Escherichia coli UTI89	NC_007946.faa	NC_007946.out
Escherichia coli UTI89 plasmid pUTI89	NC_007941.faa	NC_007941.out
Escherichia coli W3110	AC_000091.faa	AC_000091.out
Francisella tularensis subsp. holarctica	NC_007880.faa	NC_007880.out
Francisella tularensis subsp. holarctica FTA	NC_009749.faa	NC_009749.out
Francisella tularensis subsp. holarctica OSU18	NC_008369.faa	NC_008369.out
Francisella tularensis subsp. novicida U112	NC_008601.faa	NC_008601.out
Francisella tularensis subsp. tularensis FSC198	NC_008245.faa	NC_008245.out
Francisella tularensis subsp. tularensis SCHU S4	NC_006570.faa	NC_006570.out
Francisella tularensis subsp. tularensis WY96-3418	NC_009257.faa	NC_009257.out
Haemophilus ducreyi 35000HP	NC_002940.faa	NC_002940.out
Haemophilus influenzae 86-028NP	NC_007146.faa	NC_007146.out
Haemophilus influenzae PittEE	NC_009566.faa	NC_009566.out
Haemophilus influenzae PittGG	NC_009567.faa	NC_009567.out
Haemophilus influenzae Rd KW20	NC_000907.faa	NC_000907.out
Haemophilus somnus 129PT	NC_008309.faa	NC_008309.out
Haemophilus somnus 129PT plasmid pHS129	NC_006298.faa	NC_006298.out
Hahella chejuensis KCTC 2396	NC_007645.faa	NC_007645.out
Halorhodospira halophila SL1	NC_008789.faa	NC_008789.out
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	NC_009648.faa	NC_009648.out
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3	NC_009649.faa	NC_009649.out
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN4	NC_009650.faa	NC_009650.out
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN5	NC_009651.faa	NC_009651.out
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN5	NC_009652.faa	NC_009652.out
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN5	NC_009653.faa	NC_009653.out
Idiomarina loihiensis L2TR	NC_006512.faa	NC_006512.out
Legionella pneumophila str. Corby	NC_009494.faa	NC_009494.out
Legionella pneumophila Lens	NC_006369.faa	NC_006369.out
Legionella pneumophila str. Lens plasmid pLPL	NC_006366.faa	NC_006366.out
Legionella pneumophila Paris	NC_006368.faa	NC_006368.out
Legionella pneumophila str. Paris plasmid pLPP	NC_006365.faa	NC_006365.out
Legionella pneumophila subsp. pneumophila Philadelphia 1	NC_002942.faa	NC_002942.out
Mannheimia succiniciproducens MBEL55E	NC_006300.faa	NC_006300.out
Marinobacter aquaeolei VT8	NC_008740.faa	NC_008740.out
Marinobacter aquaeolei VT8 plasmid pMAQU01	NC_008738.faa	NC_008738.out
Marinobacter aquaeolei VT8 plasmid pMAQU02	NC_008739.faa	NC_008739.out
Marinomonas sp. MWYL1	NC_009654.faa	NC_009654.out
Methylococcus capsulatus Bath	NC_002977.faa	NC_002977.out
Nitrosococcus oceani ATCC 19707	NC_007484.faa	NC_007484.out
Nitrosococcus oceani ATCC 19707 plasmid A	NC_007483.faa	NC_007483.out
Pasteurella multocida Pm70	NC_002663.faa	NC_002663.out
Photobacterium profundum SS9 chromosome 1	NC_006370.faa	NC_006370.out
Photobacterium profundum SS9 chromosome 2	NC_006371.faa	NC_006371.out
Photobacterium profundum SS9 plasmid pPBPR1	NC_005871.faa	NC_005871.out
Photorhabdus luminescens subsp. laumondii TT01	NC_005126.faa	NC_005126.out
Pseudoalteromonas atlantica T6c	NC_008228.faa	NC_008228.out
Pseudoalteromonas haloplanktis TAC125 chromosome 1	NC_007481.faa	NC_007481.out
Pseudoalteromonas haloplanktis TAC125 chromosome 2	NC_007482.faa	NC_007482.out
Pseudomonas aeruginosa PA01	NC_002516.faa	NC_002516.out
Pseudomonas aeruginosa PA7	NC_009656.faa	NC_009656.out
Pseudomonas aeruginosa UCBPP-PA14	NC_008463.faa	NC_008463.out
Pseudomonas entomophila L48	NC_008027.faa	NC_008027.out
Pseudomonas fluorescens PfO-1	NC_007492.faa	NC_007492.out
Pseudomonas fluorescens Pf-5	NC_004129.faa	NC_004129.out
Pseudomonas mendocina ymp	NC_009439.faa	NC_009439.out
Pseudomonas putida F1	NC_009512.faa	NC_009512.out
Pseudomonas putida KT2440	NC_002947.faa	NC_002947.out
Pseudomonas stutzeri A1501	NC_009434.faa	NC_009434.out
Pseudomonas syringae pv. phaseolicola 1448A	NC_005773.faa	NC_005773.out
Pseudomonas syringae pv. phaseolicola 1448A large plasmid	NC_007274.faa	NC_007274.out
Pseudomonas syringae pv. phaseolicola 1448A small plasmid	NC_007275.faa	NC_007275.out
Pseudomonas syringae pv. syringae B728a	NC_007005.faa	NC_007005.out
Pseudomonas syringae pv. tomato DC3000	NC_004578.faa	NC_004578.out
Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000A	NC_004633.faa	NC_004633.out
Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000B	NC_004632.faa	NC_004632.out
Psychrobacter cryohalolentis K5	NC_007969.faa	NC_007969.out
Psychrobacter cryohalolentis K5 plasmid 1	NC_007968.faa	NC_007968.out
Psychrobacter arcticum 273-4	NC_007204.faa	NC_007204.out
Psychrobacter sp. PRwf-1	NC_009524.faa	NC_009524.out
Psychrobacter sp. PRwf-1 plasmid pRWF101	NC_009516.faa	NC_009516.out
Psychrobacter sp. PRwf-1 plasmid pRWF102	NC_009517.faa	NC_009517.out
Psychromonas ingrahamii 37	NC_008709.faa	NC_008709.out
Saccharophagus degradans 2-40	NC_007912.faa	NC_007912.out
Salmonella enterica subsp. enterica serovar Choleraesuis st	NC_006905.faa	NC_006905.out
Salmonella enterica subsp. enterica serovar Choleraesuis str.	NC_006855.faa	NC_006855.out
Salmonella enterica subsp. enterica serovar Choleraesuis str.	NC_006856.faa	NC_006856.out
Salmonella enterica subsp. enterica serovar Paratyphi A ATCC 9150	NC_006511.faa	NC_006511.out
Salmonella enterica subsp. enterica serovar Typhi CT18	NC_003198.faa	NC_003198.out
Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid	NC_003384.faa	NC_003384.out
Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid	NC_003385.faa	NC_003385.out
Salmonella enterica subsp. enterica serovar Typhi Ty2	NC_004631.faa	NC_004631.out
Salmonella typhimurium LT2	NC_003197.faa	NC_003197.out
Salmonella typhimurium LT2 plasmid pSLT	NC_003277.faa	NC_003277.out
Serratia proteamaculans 568	NC_009832.faa	NC_009832.out
Serratia proteamaculans 568 plasmid pSPRO01	NC_009829.faa	NC_009829.out
Shewanella amazonensis SB2B	NC_008700.faa	NC_008700.out
Shewanella baltica OS155	NC_009052.faa	NC_009052.out
Shewanella baltica OS155 plasmid pSbal01	NC_009035.faa	NC_009035.out
Shewanella baltica OS155 plasmid pSbal02	NC_009036.faa	NC_009036.out
Shewanella baltica OS155 plasmid pSbal03	NC_009037.faa	NC_009037.out
Shewanella baltica OS155 plasmid pSbal04	NC_009038.faa	NC_009038.out
Shewanella baltica OS185	NC_009665.faa	NC_009665.out
Shewanella baltica OS185 plasmid pS18501	NC_009661.faa	NC_009661.out
Shewanella denitrificans OS217	NC_007954.faa	NC_007954.out
Shewanella frigidimarina NCIMB 400	NC_008345.faa	NC_008345.out
Shewanella loihica PV-4	NC_009092.faa	NC_009092.out
Shewanella oneidensis MR-1	NC_004347.faa	NC_004347.out
Shewanella oneidensis MR-1 megaplasmid pMR-1	NC_004349.faa	NC_004349.out
Shewanella pealeana ATCC 700345	NC_009901.faa	NC_009901.out
Shewanella putrefaciens CN-32	NC_009438.faa	NC_009438.out
Shewanella sediminis HAW-EB3	NC_009831.faa	NC_009831.out
Shewanella sp. ANA-3	NC_008577.faa	NC_008577.out
Shewanella sp. ANA-3 plasmid 1	NC_008573.faa	NC_008573.out
Shewanella sp. MR-4	NC_008321.faa	NC_008321.out
Shewanella sp. MR-7	NC_008322.faa	NC_008322.out
Shewanella sp. MR-7 plasmid1	NC_008320.faa	NC_008320.out
Shewanella sp. W3-18-1	NC_008750.faa	NC_008750.out
Shigella boydii Sb227	NC_007613.faa	NC_007613.out
Shigella boydii Sb227 plasmid pSB4_227	NC_007608.faa	NC_007608.out
Shigella dysenteriae Sd197	NC_007606.faa	NC_007606.out
Shigella dysenteriae Sd197 plasmid pSD1_197	NC_007607.faa	NC_007607.out
Shigella dysenteriae Sd197 plasmid pSD197_spA	NC_009344.faa	NC_009344.out
Shigella flexneri 2a 301	NC_004337.faa	NC_004337.out
Shigella flexneri 2a str. 301 plasmid pCP301	NC_004851.faa	NC_004851.out
Shigella flexneri 2a 2457T	NC_004741.faa	NC_004741.out
Shigella flexneri 5 str. 8401	NC_008258.faa	NC_008258.out
Shigella sonnei Ss046	NC_007384.faa	NC_007384.out
Shigella sonnei Ss046 plasmid pSS_046	NC_007385.faa	NC_007385.out
Shigella sonnei Ss046 plasmid pSS046_spA	NC_009345.faa	NC_009345.out
Shigella sonnei Ss046 plasmid pSS046_spB	NC_009346.faa	NC_009346.out
Shigella sonnei Ss046 plasmid pSS046_spC	NC_009347.faa	NC_009347.out
Sodalis glossinidius str. 'morsitans'	NC_007712.faa	NC_007712.out
Sodalis glossinidius str. 'morsitans' plasmid pSG1	NC_007713.faa	NC_007713.out
Sodalis glossinidius str. 'morsitans' plasmid pSG2	NC_007714.faa	NC_007714.out
Sodalis glossinidius str. 'morsitans' plasmid pSG3	NC_007715.faa	NC_007715.out
Thiomicrospira crunogena XCL-2	NC_007520.faa	NC_007520.out
Vibrio cholerae 01 biovar eltor N16961 chromosome 1	NC_002505.faa	NC_002505.out
Vibrio cholerae 01 biovar eltor N16961 chromosome 2	NC_002506.faa	NC_002506.out
Vibrio cholerae O395 chromosome 1	NC_009456.faa	NC_009456.out
Vibrio cholerae O395 chromosome 2	NC_009457.faa	NC_009457.out
Vibrio fischeri ES114 chromosome 1	NC_006840.faa	NC_006840.out
Vibrio fischeri ES114 chromosome 2	NC_006841.faa	NC_006841.out
Vibrio fischeri ES114 plasmid pES100	NC_006842.faa	NC_006842.out
Vibrio harveyi ATCC BAA-1116 chromosome I	NC_009783.faa	NC_009783.out
Vibrio harveyi ATCC BAA-1116 chromosome II	NC_009784.faa	NC_009784.out
Vibrio harveyi ATCC BAA-1116 plasmid pVIBHAR	NC_009777.faa	NC_009777.out
Vibrio parahaemolyticus RIMD 2210633 chromosome 1	NC_004603.faa	NC_004603.out
Vibrio parahaemolyticus RIMD 2210633 chromosome 2	NC_004605.faa	NC_004605.out
Vibrio vulnificus CMCP6 chromosome 1	NC_004459.faa	NC_004459.out
Vibrio vulnificus CMCP6 chromosome 2	NC_004460.faa	NC_004460.out
Vibrio vulnificus YJ016 chromosome 1	NC_005139.faa	NC_005139.out
Vibrio vulnificus YJ016 chromosome 2	NC_005140.faa	NC_005140.out
Vibrio vulnificus YJ016 plasmid pYJ016	NC_005128.faa	NC_005128.out
Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis	NC_004344.faa	NC_004344.out
Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis	NC_003425.faa	NC_003425.out
Xanthomonas axonopodis pv. citri 306	NC_003919.faa	NC_003919.out
Xanthomonas axonopodis pv. citri str. 306 plasmid pXAC33	NC_003921.faa	NC_003921.out
Xanthomonas axonopodis pv. citri str. 306 plasmid pXAC64	NC_003922.faa	NC_003922.out
Xanthomonas campestris pv. campestris ATCC 33913	NC_003902.faa	NC_003902.out
Xanthomonas campestris pv. campestris str. 8004	NC_007086.faa	NC_007086.out
Xanthomonas campestris pv. vesicatoria str. 85-10	NC_007508.faa	NC_007508.out
Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183	NC_007507.faa	NC_007507.out
Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV19	NC_007505.faa	NC_007505.out
Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV2	NC_007504.faa	NC_007504.out
Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV38	NC_007506.faa	NC_007506.out
Xanthomonas oryzae pv. oryzae KACC10331	NC_006834.faa	NC_006834.out
Xanthomonas oryzae pv. oryzae MAFF 311018	NC_007705.faa	NC_007705.out
Xylella fastidiosa 9a5c	NC_002488.faa	NC_002488.out
Xylella fastidiosa 9a5c plasmid pXF1.3	NC_002489.faa	NC_002489.out
Xylella fastidiosa 9a5c plasmid pXF51	NC_002490.faa	NC_002490.out
Xylella fastidiosa Temecula1	NC_004556.faa	NC_004556.out
Xylella fastidiosa Temecula1 plasmid pXFPD1.3	NC_004554.faa	NC_004554.out
Yersinia enterocolitica subsp. enterocolitica 8081	NC_008800.faa	NC_008800.out
Yersinia enterocolitica subsp. enterocolitica 8081 plasmid pYVe8081	NC_008791.faa	NC_008791.out
Yersinia pestis Antiqua	NC_008150.faa	NC_008150.out
Yersinia pestis Antiqua plasmid pCD	NC_008122.faa	NC_008122.out
Yersinia pestis Antiqua plasmid pMT	NC_008120.faa	NC_008120.out
Yersinia pestis Antiqua plasmid pPCP	NC_008121.faa	NC_008121.out
Yersinia pestis biovar Mediaevails 91001	NC_005810.faa	NC_005810.out
Yersinia pestis biovar Medievalis str. 91001 plasmid pCD1	NC_005813.faa	NC_005813.out
Yersinia pestis biovar Medievalis str. 91001 plasmid pCRY	NC_005814.faa	NC_005814.out
Yersinia pestis biovar Medievalis str. 91001 plasmid pMT1	NC_005815.faa	NC_005815.out
Yersinia pestis biovar Medievalis str. 91001 plasmid pPCP1	NC_005816.faa	NC_005816.out
Yersinia pestis CO92	NC_003143.faa	NC_003143.out
Yersinia pestis CO92 plasmid pCD1	NC_003131.faa	NC_003131.out
Yersinia pestis CO92 plasmid pMT1	NC_003134.faa	NC_003134.out
Yersinia pestis CO92 plasmid pPCP1	NC_003132.faa	NC_003132.out
Yersinia pestis KIM	NC_004088.faa	NC_004088.out
Yersinia pestis KIM plasmid pMT-1	NC_004838.faa	NC_004838.out
Yersinia pestis Nepal516	NC_008149.faa	NC_008149.out
Yersinia pestis Nepal516 plasmid pMT	NC_008118.faa	NC_008118.out
Yersinia pestis Nepal516 plasmid pPCP	NC_008119.faa	NC_008119.out
Yersinia pestis Pestoides F	NC_009381.faa	NC_009381.out
Yersinia pestis Pestoides F plasmid CD	NC_009377.faa	NC_009377.out
Yersinia pestis Pestoides F plasmid MT	NC_009378.faa	NC_009378.out
Yersinia pseudotuberculosis IP 31758	NC_009708.faa	NC_009708.out
Yersinia pseudotuberculosis IP 31758 plasmid_153kb	NC_009705.faa	NC_009705.out
Yersinia pseudotuberculosis IP 31758 plasmid_59kb	NC_009704.faa	NC_009704.out
Yersinia pseudotuberculosis IP 32953	NC_006155.faa	NC_006155.out
Yersinia pseudotuberculosis IP 32953 plasmid pYptb32953	NC_006154.faa	NC_006154.out
Yersinia pseudotuberculosis IP 32953 plasmid pYV	NC_006153.faa	NC_006153.out
Unclassified Proteobacteria
Magnetococcus sp. MC-1	NC_008576.faa	NC_008576.out
Aquificae
Aquifex aeolicus VF5	NC_000918.faa	NC_000918.out
Aquifex aeolicus VF5 plasmid ece1	NC_001880.faa	NC_001880.out
Bacteroidetes
Bacteroides fragilis YCH46	NC_006347.faa	NC_006347.out
Bacteroides fragilis YCH46 plasmid pBFY46	NC_006297.faa	NC_006297.out
Bacteroides fragilis NCTC 9343	NC_003228.faa	NC_003228.out
Bacteroides fragilis NCTC 9343 plasmid pBF9343	NC_006873.faa	NC_006873.out
Bacteroides thetaiotaomicron VPI-5482	NC_004663.faa	NC_004663.out
Bacteroides thetaiotaomicron VPI-5482 plasmid p5482	NC_004703.faa	NC_004703.out
Bacteroides vulgatus ATCC 8482	NC_009614.faa	NC_009614.out
Cytophaga hutchinsonii ATCC 33406	NC_008255.faa	NC_008255.out
Flavobacterium johnsoniae UW101	NC_009441.faa	NC_009441.out
Flavobacterium psychrophilum JIP02/86	NC_009613.faa	NC_009613.out
Gramella forsetii KT0803	NC_008571.faa	NC_008571.out
Parabacteroides distasonis ATCC 8503	NC_009615.faa	NC_009615.out
Porphyromonas gingivalis W83	NC_002950.faa	NC_002950.out
Chlamydiae
Chlamydia muridarum Nigg	NC_002620.faa	NC_002620.out
Chlamydia muridarum Nigg plasmid pMoPn	NC_002182.faa	NC_002182.out
Chlamydia trachomatis A/HAR-13	NC_007429.faa	NC_007429.out
Chlamydia trachomatis A/HAR-13 plasmid pCTA	NC_007430.faa	NC_007430.out
Chlamydia trachomatis D/UW-3/CX	NC_000117.faa	NC_000117.out
Chlamydophila abortus S26/3	NC_004552.faa	NC_004552.out
Chlamydophila caviae GPIC	NC_003361.faa	NC_003361.out
Chlamydophila caviae GPIC plasmid pCpGP1	NC_004720.faa	NC_004720.out
Chlamydophila felis Fe/C-56	NC_007899.faa	NC_007899.out
Chlamydophila felis Fe/C-56 plasmid pCfe1	NC_007900.faa	NC_007900.out
Chlamydophila pneumoniae AR39	NC_002179.faa	NC_002179.out
Chlamydophila pneumoniae CWL029	NC_000922.faa	NC_000922.out
Chlamydophila pneumoniae J138	NC_002491.faa	NC_002491.out
Chlamydophila pneumoniae TW-183	NC_005043.faa	NC_005043.out
Parachlamydia sp. UWE25	NC_005861.faa	NC_005861.out
Chlorobi
Chlorobium chlorochromatii CaD3	NC_007514.faa	NC_007514.out
Chlorobium phaeobacteroides DSM 266	NC_008639.faa	NC_008639.out
Chlorobium tepidum TLS	NC_002932.faa	NC_002932.out
Pelodictyon luteolum DSM 273	NC_007512.faa	NC_007512.out
Prosthecochloris vibrioformis DSM 265	NC_009337.faa	NC_009337.out
Salinibacter ruber DSM 13855	NC_007677.faa	NC_007677.out
Salinibacter ruber DSM 13855 plasmid pSR35	NC_007678.faa	NC_007678.out
Chloroflexi
Roseiflexus castenholzii DSM 13941	NC_009767.faa	NC_009767.out
Roseiflexus sp. RS-1	NC_009523.faa	NC_009523.out
Cyanobacteria
Anabaena variabilis ATCC 29413	NC_007413.faa	NC_007413.out
Anabaena variabilis ATCC 29413 plasmid A	NC_007410.faa	NC_007410.out
Anabaena variabilis ATCC 29413 plasmid B	NC_007411.faa	NC_007411.out
Anabaena variabilis ATCC 29413 plasmid C	NC_007412.faa	NC_007412.out
Gloeobacter violaceus PCC 7421	NC_005125.faa	NC_005125.out
Nostoc sp. PCC 7120	NC_003272.faa	NC_003272.out
Nostoc sp. PCC 7120 plasmid pCC7120alpha	NC_003276.faa	NC_003276.out
Nostoc sp. PCC 7120 plasmid pCC7120beta	NC_003240.faa	NC_003240.out
Nostoc sp. PCC 7120 plasmid pCC7120delta	NC_003273.faa	NC_003273.out
Nostoc sp. PCC 7120 plasmid pCC7120epsilon	NC_003270.faa	NC_003270.out
Nostoc sp. PCC 7120 plasmid pCC7120gamma	NC_003267.faa	NC_003267.out
Nostoc sp. PCC 7120 plasmid pCC7120zeta	NC_003241.faa	NC_003241.out
Prochlorococcus marinus MIT 9313	NC_005071.faa	NC_005071.out
Prochlorococcus marinus NATL2A	NC_007335.faa	NC_007335.out
Prochlorococcus marinus str. AS9601	NC_008816.faa	NC_008816.out
Prochlorococcus marinus str. MIT 9215	NC_009840.faa	NC_009840.out
Prochlorococcus marinus str. MIT 9301	NC_009091.faa	NC_009091.out
Prochlorococcus marinus str. MIT 9303	NC_008820.faa	NC_008820.out
Prochlorococcus marinus str. MIT 9312	NC_007577.faa	NC_007577.out
Prochlorococcus marinus str. MIT 9515	NC_008817.faa	NC_008817.out
Prochlorococcus marinus str. NATL1A	NC_008819.faa	NC_008819.out
Prochlorococcus marinus subsp. marinus CCMP1375	NC_005042.faa	NC_005042.out
Prochlorococcus marinus subsp. pastoris CCMP1986	NC_005072.faa	NC_005072.out
Synechococcus elongatus PCC 6301	NC_006576.faa	NC_006576.out
Synechococcus elongatus PCC 7942	NC_007604.faa	NC_007604.out
Synechococcus elongatus PCC 7942 plasmid 1	NC_007595.faa	NC_007595.out
Synechococcus sp. CC9605	NC_007516.faa	NC_007516.out
Synechococcus sp. CC9902	NC_007513.faa	NC_007513.out
Synechococcus sp. JA-2-3B'a(2-13)	NC_007776.faa	NC_007776.out
Synechococcus sp. JA-3-3Ab	NC_007775.faa	NC_007775.out
Synechocystis sp. PCC 6803	NC_000911.faa	NC_000911.out
Synechocystis sp. PCC 6803 plasmid pSYSA	NC_005230.faa	NC_005230.out
Synechocystis sp. PCC 6803 plasmid pSYSG	NC_005231.faa	NC_005231.out
Synechocystis sp. PCC 6803 plasmid pSYSM	NC_005229.faa	NC_005229.out
Synechocystis sp. PCC 6803 plasmid pSYSX	NC_005232.faa	NC_005232.out
Synechococcus sp. WH 8102	NC_005070.faa	NC_005070.out
Synechococcus sp. CC9311	NC_008319.faa	NC_008319.out
Synechococcus sp. RCC307	NC_009482.faa	NC_009482.out
Synechococcus sp. WH 7803	NC_009481.faa	NC_009481.out
Thermosynechococcus elongatus BP-1	NC_004113.faa	NC_004113.out
Trichodesmium erythraeum IMS101	NC_008312.faa	NC_008312.out
Deinococcus-Thermus (Gram-negative)
Thermus thermophilus HB27	NC_005835.faa	NC_005835.out
Thermus thermophilus HB27 plasmid pTT27	NC_005838.faa	NC_005838.out
Thermus thermophilus HB8	NC_006461.faa	NC_006461.out
Thermus thermophilus HB8 plasmid pTT27	NC_006462.faa	NC_006462.out
Thermus thermophilus HB8 plasmid pTT8	NC_006463.faa	NC_006463.out
Firmicutes (class Mollicutes)
Mycoplasma agalactiae PG2*	NC_009497.faa	NC_009497.out
Mycoplasma capricolum subsp. capricolum ATCC 27343*	NC_007633.faa	NC_007633.out
Mesoplasma florum L1	NC_006055.faa	NC_006055.out
Mycoplasma gallisepticum R*	NC_004829.faa	NC_004829.out
Mycoplasma genitalium G-37*	NC_000908.faa	NC_000908.out
Mycoplasma hyopneumoniae 232*	NC_006360.faa	NC_006360.out
Mycoplasma hyopneumoniae 7448*	NC_007332.faa	NC_007332.out
Mycoplasma hyopneumoniae J*	NC_007295.faa	NC_007295.out
Mycoplasma mobile 163K*	NC_006908.faa	NC_006908.out
Mycoplasma mycoides subsp. mycoides SC PG1*	NC_005364.faa	NC_005364.out
Mycoplasma penetrans HF-2*	NC_004432.faa	NC_004432.out
Mycoplasma pneumoniae M129*	NC_000912.faa	NC_000912.out
Mycoplasma pulmonis UAB CTIP*	NC_002771.faa	NC_002771.out
Mycoplasma synoviae 53*	NC_007294.faa	NC_007294.out
Syntrophomonas wolfei subsp. wolfei str. Goettingen	NC_008346.faa	NC_008346.out
Ureaplasma parvum serovar 3 ATCC 700970	NC_002162.faa	NC_002162.out
Onion yellows phytoplasma OY-M	NC_005303.faa	NC_005303.out
Fusobacteria
Fusobacterium nucleatum subsp. nucleatum ATCC 25586	NC_003454.faa	NC_003454.out
Planctomycetes
Rhodopirellula baltica SH 1	NC_005027.faa	NC_005027.out
Spirochaetes
Borrelia afzelii PKo	NC_008277.faa	NC_008277.out
Borrelia afzelii PKo plasmid cp27	NC_008274.faa	NC_008274.out
Borrelia afzelii PKo plasmid cp30	NC_008273.faa	NC_008273.out
Borrelia afzelii PKo plasmid lp25	NC_008569.faa	NC_008569.out
Borrelia afzelii PKo plasmid lp28	NC_008568.faa	NC_008568.out
Borrelia afzelii PKo plasmid lp32	NC_008567.faa	NC_008567.out
Borrelia afzelii PKo plasmid lp34	NC_008566.faa	NC_008566.out
Borrelia afzelii PKo plasmid lp60	NC_008564.faa	NC_008564.out
Borrelia afzelii PKo plasmid lp60-2	NC_008565.faa	NC_008565.out
Borrelia burgdorferi B31	NC_001318.faa	NC_001318.out
Borrelia burgdorferi B31 plasmid cp32-1	NC_000948.faa	NC_000948.out
Borrelia burgdorferi B31 plasmid cp32-3	NC_000949.faa	NC_000949.out
Borrelia burgdorferi B31 plasmid cp32-4	NC_000950.faa	NC_000950.out
Borrelia burgdorferi B31 plasmid cp32-6	NC_000951.faa	NC_000951.out
Borrelia burgdorferi B31 plasmid cp32-7	NC_000952.faa	NC_000952.out
Borrelia burgdorferi B31 plasmid cp32-8	NC_000953.faa	NC_000953.out
Borrelia burgdorferi B31 plasmid cp32-9	NC_000954.faa	NC_000954.out
Borrelia burgdorferi B31 plasmid cp9	NC_001904.faa	NC_001904.out
Borrelia burgdorferi B31 plasmid lp17	NC_001849.faa	NC_001849.out
Borrelia burgdorferi B31 plasmid lp21	NC_000955.faa	NC_000955.out
Borrelia burgdorferi B31 plasmid lp25	NC_001850.faa	NC_001850.out
Borrelia burgdorferi B31 plasmid lp28-1	NC_001851.faa	NC_001851.out
Borrelia burgdorferi B31 plasmid lp28-2	NC_001852.faa	NC_001852.out
Borrelia burgdorferi B31 plasmid lp28-3	NC_001853.faa	NC_001853.out
Borrelia burgdorferi B31 plasmid lp28-4	NC_001854.faa	NC_001854.out
Borrelia burgdorferi B31 plasmid lp36	NC_001855.faa	NC_001855.out
Borrelia burgdorferi B31 plasmid lp38	NC_001856.faa	NC_001856.out
Borrelia burgdorferi B31 plasmid lp5	NC_000957.faa	NC_000957.out
Borrelia burgdorferi B31 plasmid lp54	NC_001857.faa	NC_001857.out
Borrelia burgdorferi B31 plasmid lp56	NC_000956.faa	NC_000956.out
Borrelia burgdorferi plasmid cp26	NC_001903.faa	NC_001903.out
Borrelia garinii PBi	NC_006156.faa	NC_006156.out
Borrelia garinii PBi plasmid cp26	NC_006128.faa	NC_006128.out
Borrelia garinii PBi plasmid lp54	NC_006129.faa	NC_006129.out
Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1	NC_008510.faa	NC_008510.out
Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 2	NC_008511.faa	NC_008511.out
Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1	NC_008508.faa	NC_008508.out
Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 2	NC_008509.faa	NC_008509.out
Leptospira interrogans serovar Copenhageni str. Fiocruz LI-130 chromosome 1	NC_005823.faa	NC_005823.out
Leptospira interrogans serovar Copenhageni str. Fiocruz LI-130 chromosome 2	NC_005824.faa	NC_005824.out
Leptospira interrogans serovar lai 56601 chromosome 1	NC_004342.faa	NC_004342.out
Leptospira interrogans serovar lai 56601 chromosome 2	NC_004343.faa	NC_004343.out
Treponema denticola ATCC 35405	NC_002967.faa	NC_002967.out
Treponema pallidum subsp. pallidum Nichols	NC_000919.faa	NC_000919.out
Thermotogae
Fervidobacterium nodosum Rt17-B1	NC_009718.faa	NC_009718.out
Thermosipho melanesiensis BI429	NC_009616.faa	NC_009616.out
Thermotoga maritima MSB8	NC_000853.faa	NC_000853.out
Thermotoga petrophila RKU-1	NC_009486.faa	NC_009486.out

Gram-positive bacterial chromosomes:
Organism (listed by phylum/class)	Input	PSORTb Output
Actinobacteria
Acidothermus cellulolyticus 11B	NC_008578.faa	NC_008578.out
Arthrobacter aurescens TC1	NC_008711.faa	NC_008711.out
Arthrobacter aurescens TC1 plasmid TC1	NC_008712.faa	NC_008712.out
Arthrobacter aurescens TC1 plasmid TC2	NC_008713.faa	NC_008713.out
Arthrobacter sp. FB24 chromosome 1	NC_008541.faa	NC_008541.out
Arthrobacter sp. FB24 plasmid 1	NC_008537.faa	NC_008537.out
Arthrobacter sp. FB24 plasmid 2	NC_008538.faa	NC_008538.out
Arthrobacter sp. FB24 plasmid 3	NC_008539.faa	NC_008539.out
Bifidobacterium adolescentis ATCC 15703	NC_008618.faa	NC_008618.out
Bifidobacterium longum NCC2705	NC_004307.faa	NC_004307.out
Bifidobacterium longum NCC2705 plasmid pBLO1	NC_004943.faa	NC_004943.out
Clavibacter michiganensis subsp. michiganensis NCPPB 382	NC_009480.faa	NC_009480.out
Clavibacter michiganensis subsp. michiganensis NCPPB 382 plasmid pCM1	NC_009478.faa	NC_009478.out
Clavibacter michiganensis subsp. michiganensis NCPPB 382 plasmid pCM2	NC_009479.faa	NC_009479.out
Corynebacterium diphtheriae NCTC 13129	NC_002935.faa	NC_002935.out
Corynebacterium efficiens YS-314	NC_004369.faa	NC_004369.out
Corynebacterium glutamicum ATCC 13032 (Bielefeld)	NC_006958.faa	NC_006958.out
Corynebacterium glutamicum ATCC 13032 (Kitasato Univ.)	NC_003450.faa	NC_003450.out
Corynebacterium glutamicum R	NC_009342.faa	NC_009342.out
Corynebacterium glutamicum R plasmid pCGR1	NC_009343.faa	NC_009343.out
Corynebacterium jeikeium K411	NC_007164.faa	NC_007164.out
Corynebacterium jeikeium K411 plasmid pKW4	NC_003080.faa	NC_003080.out
Frankia alni ACN14a	NC_008278.faa	NC_008278.out
Frankia sp. CcI3	NC_007777.faa	NC_007777.out
Frankia sp. EAN1pec	NC_009921.faa	NC_009921.out
Kineococcus radiotolerans SRS30216	NC_009664.faa	NC_009664.out
Kineococcus radiotolerans SRS30216 plasmid pKRAD01	NC_009806.faa	NC_009806.out
Kineococcus radiotolerans SRS30216 plasmid pKRAD02	NC_009660.faa	NC_009660.out
Leifsonia xyli subsp. xyli CTCB07	NC_006087.faa	NC_006087.out
Mycobacterium avium 104	NC_008595.faa	NC_008595.out
Mycobacterium avium subsp. paratuberculosis k10	NC_002944.faa	NC_002944.out
Mycobacterium bovis BCG str. Pasteur 1173P2	NC_008769.faa	NC_008769.out
Mycobacterium bovis subsp. bovis AF2122/97	NC_002945.faa	NC_002945.out
Mycobacterium gilvum PYR-GCK	NC_009338.faa	NC_009338.out
Mycobacterium gilvum PYR-GCK plasmid pMFLV01	NC_009339.faa	NC_009339.out
Mycobacterium gilvum PYR-GCK plasmid pMFLV02	NC_009340.faa	NC_009340.out
Mycobacterium gilvum PYR-GCK plasmid pMFLV03	NC_009341.faa	NC_009341.out
Mycobacterium leprae TN	NC_002677.faa	NC_002677.out
Mycobacterium smegmatis str. MC2 155	NC_008596.faa	NC_008596.out
Mycobacterium sp. JLS	NC_009077.faa	NC_009077.out
Mycobacterium sp. KMS	NC_008705.faa	NC_008705.out
Mycobacterium sp. KMS plasmid pMKMS01	NC_008703.faa	NC_008703.out
Mycobacterium sp. KMS plasmid pMKMS02	NC_008704.faa	NC_008704.out
Mycobacterium sp. MCS	NC_008146.faa	NC_008146.out
Mycobacterium sp. MCS plasmid1	NC_008147.faa	NC_008147.out
Mycobacterium tuberculosis CDC1551	NC_002755.faa	NC_002755.out
Mycobacterium tuberculosis F11	NC_009565.faa	NC_009565.out
Mycobacterium tuberculosis H37Ra	NC_009525.faa	NC_009525.out
Mycobacterium tuberculosis H37Rv	NC_000962.faa	NC_000962.out
Mycobacterium ulcerans Agy99	NC_008611.faa	NC_008611.out
Mycobacterium vanbaalenii PYR-1	NC_008726.faa	NC_008726.out
Nocardia farcinica IFM 10152	NC_006361.faa	NC_006361.out
Nocardia farcinica IFM 10152 plasmid pNF1	NC_006362.faa	NC_006362.out
Nocardia farcinica IFM 10152 plasmid pNF2	NC_006363.faa	NC_006363.out
Nocardioides sp. JS614	NC_008699.faa	NC_008699.out
Nocardioides sp. JS614 plasmid pNOCA01	NC_008697.faa	NC_008697.out
Propionibacterium acnes KPA171202	NC_006085.faa	NC_006085.out
Rhodococcus sp. RHA1	NC_008268.faa	NC_008268.out
Rhodococcus sp. RHA1 plasmid pRHL1	NC_008269.faa	NC_008269.out
Rhodococcus sp. RHA1 plasmid pRHL2	NC_008270.faa	NC_008270.out
Rhodococcus sp. RHA1 plasmid pRHL3	NC_008271.faa	NC_008271.out
Rubrobacter xylanophilus DSM 9941	NC_008148.faa	NC_008148.out
Saccharopolyspora erythraea NRRL 2338	NC_009142.faa	NC_009142.out
Salinispora tropica CNB-440	NC_009380.faa	NC_009380.out
Streptomyces avermitilis MA-4680	NC_003155.faa	NC_003155.out
Streptomyces avermitilis MA-4680 plasmid SAP1	NC_004719.faa	NC_004719.out
Streptomyces coelicolor A3(2)	NC_003888.faa	NC_003888.out
Streptomyces coelicolor A3(2) plasmid SCP1	NC_003903.faa	NC_003903.out
Streptomyces coelicolor A3(2) plasmid SCP2	NC_003904.faa	NC_003904.out
Symbiobacterium thermophilum IAM 14863	NC_006177.faa	NC_006177.out
Thermobifida fusca YX	NC_007333.faa	NC_007333.out
Tropheryma whipplei TW08/27	NC_004551.faa	NC_004551.out
Tropheryma whipplei Twist	NC_004572.faa	NC_004572.out
Chloroflexi
Dehalococcoides ethenogenes 195	NC_002936.faa	NC_002936.out
Dehalococcoides sp. BAV1	NC_009455.faa	NC_009455.out
Dehalococcoides sp. CBDB1	NC_007356.faa	NC_007356.out
Deinococcus-Thermus (Gram-positive)
Deinococcus geothermalis DSM 11300	NC_008025.faa	NC_008025.out
Deinococcus geothermalis DSM 11300 plasmid 1	NC_008010.faa	NC_008010.out
Deinococcus geothermalis DSM 11300 plasmid pDGEO02	NC_009939.faa	NC_009939.out
Deinococcus radiodurans R1 chromosome 1	NC_001263.faa	NC_001263.out
Deinococcus radiodurans R1 chromosome 2	NC_001264.faa	NC_001264.out
Deinococcus radiodurans R1 plasmid CP1	NC_000959.faa	NC_000959.out
Deinococcus radiodurans R1 plasmid MP1	NC_000958.faa	NC_000958.out
Firmicutes (class Bacilli)
Alkaliphilus metalliredigens QYMF	NC_009633.faa	NC_009633.out
Alkaliphilus oremlandii OhILAs	NC_009922.faa	NC_009922.out
Bacillus amyloliquefaciens FZB42	NC_009725.faa	NC_009725.out
Bacillus anthracis A2012	NC_003995.faa	NC_003995.out
Bacillus anthracis Ames	NC_003997.faa	NC_003997.out
Bacillus anthracis Ames Ancestor 0581	NC_007530.faa	NC_007530.out
Bacillus anthracis str. 'Ames Ancestor' plasmid pXO1	NC_007322.faa	NC_007322.out
Bacillus anthracis str. 'Ames Ancestor' plasmid pXO2	NC_007323.faa	NC_007323.out
Bacillus anthracis Sterne	NC_005945.faa	NC_005945.out
Bacillus cereus ATCC 10987	NC_003909.faa	NC_003909.out
Bacillus cereus ATCC 10987 plasmid pBc10987	NC_005707.faa	NC_005707.out
Bacillus cereus ATCC14579	NC_004722.faa	NC_004722.out
Bacillus cereus ATCC 14579 plasmid pBClin15	NC_004721.faa	NC_004721.out
Bacillus cereus E33L	NC_006274.faa	NC_006274.out
Bacillus cereus E33L plasmid pE33L466	NC_007103.faa	NC_007103.out
Bacillus cereus E33L plasmid pE33L5	NC_007104.faa	NC_007104.out
Bacillus cereus E33L plasmid pE33L54	NC_007105.faa	NC_007105.out
Bacillus cereus E33L plasmid pE33L8	NC_007106.faa	NC_007106.out
Bacillus cereus E33L plasmid pE33L9	NC_007107.faa	NC_007107.out
Bacillus cereus subsp. cytotoxis NVH 391-98	NC_009674.faa	NC_009674.out
Bacillus cereus subsp. cytotoxis NVH 391-98 plasmid pBC9801	NC_009673.faa	NC_009673.out
Bacillus clausii KSM-K16	NC_006582.faa	NC_006582.out
Bacillus halodurans C-125	NC_002570.faa	NC_002570.out
Bacillus licheniformis ATCC 14580	NC_006270.faa	NC_006270.out
Bacillus licheniformis ATCC 14580/DSM 13	NC_006322.faa	NC_006322.out
Bacillus pumilus SAFR-032	NC_009848.faa	NC_009848.out
Bacillus subtilis subsp. subtilis 168	NC_000964.faa	NC_000964.out
Bacillus thuringiensis serovar konkukian 97-27	NC_005957.faa	NC_005957.out
Bacillus thuringiensis serovar konkukian str. 97-27 plasmid	NC_006578.faa	NC_006578.out
Bacillus thuringiensis str. Al Hakam	NC_008600.faa	NC_008600.out
Bacillus thuringiensis str. Al Hakam plasmid pALH1	NC_008598.faa	NC_008598.out
Enterococcus faecalis V583	NC_004668.faa	NC_004668.out
Enterococcus faecalis V583 plasmid pTEF1	NC_004669.faa	NC_004669.out
Enterococcus faecalis V583 plasmid pTEF2	NC_004671.faa	NC_004671.out
Enterococcus faecalis V583 plasmid pTEF3	NC_004670.faa	NC_004670.out
Geobacillus kaustophilus HTA426	NC_006510.faa	NC_006510.out
Geobacillus kaustophilus HTA426 plasmid pHTA426	NC_006509.faa	NC_006509.out
Geobacillus thermodenitrificans NG80-2	NC_009328.faa	NC_009328.out
Geobacillus thermodenitrificans NG80-2 plasmid pLW1071	NC_009329.faa	NC_009329.out
Lactobacillus acidophilus NCFM	NC_006814.faa	NC_006814.out
Lactobacillus brevis ATCC 367	NC_008497.faa	NC_008497.out
Lactobacillus brevis ATCC 367 plasmid 1	NC_008498.faa	NC_008498.out
Lactobacillus brevis ATCC 367 plasmid 1	NC_008499.faa	NC_008499.out
Lactobacillus casei ATCC 334	NC_008526.faa	NC_008526.out
Lactobacillus casei ATCC 334 plasmid 1	NC_008502.faa	NC_008502.out
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842	NC_008054.faa	NC_008054.out
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	NC_008529.faa	NC_008529.out
Lactobacillus gasseri ATCC 33323	NC_008530.faa	NC_008530.out
Lactobacillus johnsonii NCC 533	NC_005362.faa	NC_005362.out
Lactobacillus plantarum WCFS1	NC_004567.faa	NC_004567.out
Lactobacillus plantarum WCFS1 plasmid pWCFS101	NC_006375.faa	NC_006375.out
Lactobacillus plantarum WCFS1 plasmid pWCFS102	NC_006376.faa	NC_006376.out
Lactobacillus plantarum WCFS1 plasmid pWCFS103	NC_006377.faa	NC_006377.out
Lactobacillus reuteri F275	NC_009513.faa	NC_009513.out
Lactobacillus sakei subsp. sakei 23K	NC_007576.faa	NC_007576.out
Lactobacillus salivarius subsp. salivarius UCC118	NC_007929.faa	NC_007929.out
Lactobacillus salivarius subsp. salivarius UCC118 plasmid	NC_006529.faa	NC_006529.out
Lactobacillus salivarius subsp. salivarius UCC118 plasmid	NC_006530.faa	NC_006530.out
Lactobacillus salivarius subsp. salivarius UCC118 plasmid pMP118	NC_007930.faa	NC_007930.out
Lactococcus lactis Il1403	NC_002662.faa	NC_002662.out
Lactococcus lactis subsp. cremoris MG1363	NC_009004.faa	NC_009004.out
Lactococcus lactis subsp. cremoris SK11	NC_008527.faa	NC_008527.out
Lactococcus lactis subsp. cremoris SK11 plasmid 1	NC_008503.faa	NC_008503.out
Lactococcus lactis subsp. cremoris SK11 plasmid 2	NC_008504.faa	NC_008504.out
Lactococcus lactis subsp. cremoris SK11 plasmid 3	NC_008505.faa	NC_008505.out
Lactococcus lactis subsp. cremoris SK11 plasmid 4	NC_008506.faa	NC_008506.out
Lactococcus lactis subsp. cremoris SK11 plasmid 5	NC_008507.faa	NC_008507.out
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293	NC_008531.faa	NC_008531.out
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 plasmid pLEUM1	NC_008496.faa	NC_008496.out
Listeria innocua Clip 11262 chromosome	NC_003212.faa	NC_003212.out
Listeria innocua Clip 11262 plasmid pLI100	NC_003383.faa	NC_003383.out
Listeria monocytogenes EGD-e	NC_003210.faa	NC_003210.out
Listeria monocytogenes 4b F2365	NC_002973.faa	NC_002973.out
Listeria welshimeri serovar 6b str. SLCC5334	NC_008555.faa	NC_008555.out
Oceanobacillus iheyensis HTE831	NC_004193.faa	NC_004193.out
Oenococcus oeni PSU-1	NC_008528.faa	NC_008528.out
Pediococcus pentosaceus ATCC 25745	NC_008525.faa	NC_008525.out
Staphylococcus aureus RF122	NC_007622.faa	NC_007622.out
Staphylococcus aureus subsp. aureus COL	NC_002951.faa	NC_002951.out
Staphylococcus aureus subsp. aureus COL plasmid pT181	NC_006629.faa	NC_006629.out
Staphylococcus aureus subsp. aureus JH1	NC_009632.faa	NC_009632.out
Staphylococcus aureus subsp. aureus JH1 plasmid pSJH101	NC_009619.faa	NC_009619.out
Staphylococcus aureus subsp. aureus JH9	NC_009487.faa	NC_009487.out
Staphylococcus aureus subsp. aureus JH9 plasmid pSJH90	NC_009477.faa	NC_009477.out
Staphylococcus aureus subsp. aureus MRSA252	NC_002952.faa	NC_002952.out
Staphylococcus aureus subsp. aureus MSSA476	NC_002953.faa	NC_002953.out
Staphylococcus aureus subsp. aureus MSSA476 plasmid pSAS	NC_005951.faa	NC_005951.out
Staphylococcus aureus subsp. aureus Mu3	NC_009782.faa	NC_009782.out
Staphylococcus aureus subsp. aureus Mu50	NC_002758.faa	NC_002758.out
Staphylococcus aureus subsp. aureus Mu50 plasmid VRSAp	NC_002774.faa	NC_002774.out
Staphylococcus aureus subsp. aureus MW2	NC_003923.faa	NC_003923.out
Staphylococcus aureus subsp. aureus N315	NC_002745.faa	NC_002745.out
Staphylococcus aureus subsp. aureus N315 plasmid pN315	NC_003140.faa	NC_003140.out
Staphylococcus aureus subsp. aureus NCTC 8325	NC_007795.faa	NC_007795.out
Staphylococcus aureus subsp. aureus str. Newman	NC_009641.faa	NC_009641.out
Staphylococcus aureus subsp. aureus USA300	NC_007793.faa	NC_007793.out
Staphylococcus aureus subsp. aureus USA300 plasmid pUSA01	NC_007790.faa	NC_007790.out
Staphylococcus aureus subsp. aureus USA300 plasmid pUSA02	NC_007791.faa	NC_007791.out
Staphylococcus aureus subsp. aureus USA300 plasmid pUSA03	NC_007792.faa	NC_007792.out
Staphylococcus epidermidis ATCC 12228	NC_004461.faa	NC_004461.out
Staphylococcus epidermidis ATCC 12228 plasmid pSE-12228-01	NC_005008.faa	NC_005008.out
Staphylococcus epidermidis ATCC 12228 plasmid pSE-12228-02	NC_005007.faa	NC_005007.out
Staphylococcus epidermidis ATCC 12228 plasmid pSE-12228-03	NC_005006.faa	NC_005006.out
Staphylococcus epidermidis ATCC 12228 plasmid pSE-12228-04	NC_005005.faa	NC_005005.out
Staphylococcus epidermidis ATCC 12228 plasmid pSE-12228-05	NC_005004.faa	NC_005004.out
Staphylococcus epidermidis ATCC 12228 plasmid pSE-12228-06	NC_005003.faa	NC_005003.out
Staphylococcus epidermidis RP62A	NC_002976.faa	NC_002976.out
Staphylococcus epidermidis RP62A plasmid pSERP	NC_006663.faa	NC_006663.out
Staphylococcus haemolyticus JCSC1435	NC_007168.faa	NC_007168.out
Staphylococcus saprophyticus subsp. saprophyticus	NC_007350.faa	NC_007350.out
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305	NC_007351.faa	NC_007351.out
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305	NC_007352.faa	NC_007352.out
Streptococcus agalactiae 2603V/R	NC_004116.faa	NC_004116.out
Streptococcus agalactiae A909	NC_007432.faa	NC_007432.out
Streptococcus agalactiae NEM316	NC_004368.faa	NC_004368.out
Streptococcus gordonii str. Challis substr. CH1	NC_009785.faa	NC_009785.out
Streptococcus mutans UA159	NC_004350.faa	NC_004350.out
Streptococcus pneumonia R6	NC_003098.faa	NC_003098.out
Streptococcus pneumonia TIGR4	NC_003028.faa	NC_003028.out
Streptococcus pneumoniae D39	NC_008533.faa	NC_008533.out
Streptococcus pyogenes M1 GAS	NC_002737.faa	NC_002737.out
Streptococcus pyogenes MGAS10270	NC_008022.faa	NC_008022.out
Streptococcus pyogenes MGAS10394	NC_006086.faa	NC_006086.out
Streptococcus pyogenes MGAS10750	NC_008024.faa	NC_008024.out
Streptococcus pyogenes MGAS2096	NC_008023.faa	NC_008023.out
Streptococcus pyogenes MGAS315	NC_004070.faa	NC_004070.out
Streptococcus pyogenes MGAS5005	NC_007297.faa	NC_007297.out
Streptococcus pyogenes MGAS6180	NC_007296.faa	NC_007296.out
Streptococcus pyogenes MGAS8232	NC_003485.faa	NC_003485.out
Streptococcus pyogenes MGAS9429	NC_008021.faa	NC_008021.out
Streptococcus pyogenes SSI-1	NC_004606.faa	NC_004606.out
Streptococcus pyogenes str. Manfredo	NC_009332.faa	NC_009332.out
Streptococcus sanguinis SK36	NC_009009.faa	NC_009009.out
Streptococcus suis 05ZYH33	NC_009442.faa	NC_009442.out
Streptococcus suis 98HAH33	NC_009443.faa	NC_009443.out
Streptococcus thermophilus CNRZ1066	NC_006449.faa	NC_006449.out
Streptococcus thermophilus LMD-9	NC_008532.faa	NC_008532.out
Streptococcus thermophilus LMD-9 plasmid 1	NC_008500.faa	NC_008500.out
Streptococcus thermophilus LMD-9 plasmid 2	NC_008501.faa	NC_008501.out
Streptococcus thermophilus LMG 18311	NC_006448.faa	NC_006448.out
Firmicutes (class Clostridia)
Caldicellulosiruptor saccharolyticus DSM 8903	NC_009437.faa	NC_009437.out
Carboxydothermus hydrogenoformans Z-2901	NC_007503.faa	NC_007503.out
Clostridium acetobutylicum ATCC 824	NC_003030.faa	NC_003030.out
Clostridium acetobutylicum ATCC 824 plasmid pSOL1	NC_001988.faa	NC_001988.out
Clostridium beijerinckii NCIMB 8052	NC_009617.faa	NC_009617.out
Clostridium botulinum A str. ATCC 19397	NC_009697.faa	NC_009697.out
Clostridium botulinum A str. ATCC 3502	NC_009495.faa	NC_009495.out
Clostridium botulinum A str. ATCC 3502 plasmid pBOT3502	NC_009496.faa	NC_009496.out
Clostridium botulinum A str. Hall	NC_009698.faa	NC_009698.out
Clostridium botulinum F str. Langeland	NC_009699.faa	NC_009699.out
Clostridium botulinum F str. Langeland plasmid pCLI	NC_009700.faa	NC_009700.out
Clostridium difficile 630	NC_009089.faa	NC_009089.out
Clostridium difficile 630 plasmid pCD630	NC_008226.faa	NC_008226.out
Clostridium kluyveri DSM 555	NC_009706.faa	NC_009706.out
Clostridium kluyveri DSM 555 plasmid pCKL555A	NC_009466.faa	NC_009466.out
Clostridium novyi NT	NC_008593.faa	NC_008593.out
Clostridium perfringens 13	NC_003366.faa	NC_003366.out
Clostridium perfringens ATCC 13124	NC_008261.faa	NC_008261.out
Clostridium perfringens SM101	NC_008262.faa	NC_008262.out
Clostridium perfringens SM101 plasmid 1	NC_008263.faa	NC_008263.out
Clostridium perfringens SM101 plasmid 2	NC_008264.faa	NC_008264.out
Clostridium perfringens phage phiSM101	NC_008265.faa	NC_008265.out
Clostridium perfringens str. 13 plasmid pCP13	NC_003042.faa	NC_003042.out
Clostridium phytofermentans ISDg	NC_010001.faa	NC_010001.out
Clostridium tetani E88	NC_004557.faa	NC_004557.out
Clostridium tetani E88 plasmid pE88	NC_004565.faa	NC_004565.out
Clostridium thermocellum ATCC 27405	NC_009012.faa	NC_009012.out
Desulfitobacterium hafniense Y51	NC_007907.faa	NC_007907.out
Desulfotomaculum reducens MI-1	NC_009253.faa	NC_009253.out
Moorella thermoacetica ATCC 39073	NC_007644.faa	NC_007644.out
Pelotomaculum thermopropionicum SI	NC_009454.faa	NC_009454.out
Thermoanaerobacter tengcongensis**	NC_003869.faa	NC_003869.out
Firmicutes (class Mollicutes)
Aster yellows witches'-broom phytoplasma AYWB	NC_007716.faa	NC_007716.out
Aster yellows witches'-broom phytoplasma AYWB plasmid pAYWB-I	NC_007717.faa	NC_007717.out
Aster yellows witches'-broom phytoplasma AYWB plasmid pAYWB-II	NC_007718.faa	NC_007718.out
Aster yellows witches'-broom phytoplasma AYWB plasmid pAYWB-III	NC_007719.faa	NC_007719.out
Aster yellows witches'-broom phytoplasma AYWB plasmid pAYWB-IV	NC_007720.faa	NC_007720.out

* Mycoplasma species are unusual bacteria in that they have no cell wall (hence they stain Gram-negative since there is no cell wall to retain the stain) yet they contain components similar to Gram-positive bacteria. In PSORTb v.2 we have analysed them as Gram-negative bacteria, reflecting their Gram stain, however in PSORTb v.3 we have developed a customized protein localization module more suitable for such bacteria. Please access the new PSORTdb for their updated precomputed results.

** This bacterium stains Gram-negative, however it contains a gene repertoire consistent with a Gram-positive bacterium, it is most similar to Bacillus, and does not contain outer membrane proteins, nor critical LPS biosynthesis components. Therefore it has been analyzed as a "Gram-positive".

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