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Archived Genomes - PSORT-B v.1.1.2

The following Gram-negative bacterial genome RefSeqs from NCBI's Genome database have been analyzed using PSORT-B version 1.1.2. Two files are available for each genome - the inputted FASTA file (accession.faa) and the outputted PSORT-B results, in tab-delimited text format (accession.faa.psort). The tab delimited text file can easily be imported into your favourite spreadsheet or database program.

Important: Precomputed genomes using the current version of PSORT-B are available! Check the PSORT-B v.2.0 Precomputed Genomes for the latest Gram-negative and Gram-positive genomic analyses.

Genome Input File PSORT-B v.1.1 Results
Proteobacteria    
Alpha subdivision    
Agrobacterium tumefaciens str. C58 (Cereon) circular chromosome NC_003062.faa NC_003062.faa.psort
Agrobacterium tumefaciens str. C58 (Cereon) linear chromosome NC_003063.faa NC_003063.faa.psort
Agrobacterium tumefaciens str. C58 (U. Washington) circular chromosome NC_003304.faa NC_003304.faa.psort
Agrobacterium tumefaciens str. C58 (U. Washington) linear chromosome NC_003305.faa NC_003305.faa.psort
Bradyrhizobium japonicum USDA 110 NC_004463.faa NC_004463.faa.psort
Brucella melitensis 16M chromosome 1 NC_003317.faa NC_003317.faa.psort
Brucella melitensis 16M chromosome 2 NC_003318.faa NC_003318.faa.psort
Brucella suis 1330 chromosome 1 NC_004310.faa NC_004310.faa.psort
Brucella suis 1330 chromosome 2 NC_004311.faa NC_004311.faa.psort
Caulobacter crescentus CB15 NC_002696.faa NC_002696.faa.psort
Mesorhizobium loti MAFF303099 NC_002678.faa NC_002678.faa.psort
Rickettsia conorii Malish 7 NC_003103.faa NC_003103.faa.psort
Rickettsia prowazekii Madrid E NC_000963.faa NC_000963.faa.psort
Sinorhizobium meliloti 1021 NC_003047.faa NC_003047.faa.psort
Beta subdivision    
Ralstonia solanacearum GMI1000 NC_003295.faa NC_003295.faa.psort
Neisseria meningitidis MC58 NC_003112.faa NC_003112.faa.psort
Neisseria meningitidis Z2491 NC_003116.faa NC_003116.faa.psort
Gamma subdivision    
Buchnera aphidicola str. Ap (Acyrthosiphon pisum) NC_002528.faa NC_002528.faa.psort
Buchnera aphidicola str. Bp (Baizongia pistaciae) NC_004545.faa NC_004545.faa.psort
Buchnera aphidicola str. Sg (Schizaphis graminum) NC_004061.faa NC_004061.faa.psort
Coxiella burnetii RSA 493 NC_002971.faa NC_002971.faa.psort
Escherichia coli K12 MG1655 NC_000913.faa NC_000913.faa.psort
Escherichia coli O157:H7 Sakai NC_002695.faa NC_002695.faa.psort
Escherichia coli O157:H7 EDL933 NC_002655.faa NC_002655.faa.psort
Haemophilus influenzae Rd NC_000907.faa NC_000907.faa.psort
Pasteurella multocida PM70 NC_002663.faa NC_002663.faa.psort
Pseudomonas aeruginosa PA01 NC_002516.faa NC_002516.faa.psort
Pseudomonas putida KT2440 NC_002947.faa NC_002947.faa.psort
Pseudomonas syringae pv. tomato str. DC3000 NC_004578.faa NC_004578.faa.psort
Salmonella enterica subsp. enterica serovar Typhi NC_003198.faa NC_003198.faa.psort
Salmonella enterica subsp. enterica serovar Typhi Ty2 NC_004631.faa NC_004631.faa.psort
Salmonella typhimurium LT2 SGSC1412 NC_003197.faa NC_003197.faa.psort
Shewanella oneidensis (putrefaciens) MR-1 ATCC700550 NC_004347.faa NC_004347.faa.psort
Shigella flexneri 2a str. 301 NC_004337.faa NC_004337.faa.psort
Xylella fastidiosa CVC 9a5c NC_002488.faa NC_002488.faa.psort
Xylella fastidiosa Temecula1 NC_004556.faa NC_004556.faa.psort
Vibrio cholerae O1 (El Tor) chromosome 1 NC_002505.faa NC_002505.faa.psort
Vibrio cholerae O1 (El Tor) chromosome 2 NC_002506.faa NC_002506.faa.psort
Vibrio parahaemolyticus RIMD 2210633 chromosome 1 NC_004603.faa NC_004603.faa.psort
Vibrio parahaemolyticus RIMD 2210633 chromosome 2 NC_004605.faa NC_004605.faa.psort
Vibrio vulnificus CMCP6 chromosome 1 NC_004459.faa NC_004459.faa.psort
Vibrio vulnificus CMCP6 chromosome 2 NC_004460.faa NC_004460.faa.psort
Wigglesworthia brevipalpis NC_004344.faa NC_004344.faa.psort
Xanthomonas campestris pv. campestris str. ATCC 33913 NC_003902.faa NC_003902.faa.psort
Yersinia pestis CO92 (Orientalis) NC_003143.faa NC_003143.faa.psort
Yersinia pestis KIM5 P12 (Mediaevalis) NC_004088.faa NC_004088.faa.psort
Delta/Epsilon subdivisions    
Campylobacter jejuni subsp. jejuni NCTC 11168 NC_002163.faa NC_002163.faa.psort
Helicobacter pylori 26695 NC_000915.faa NC_000915.faa.psort
Helicobacter pylori J99 NC_000921.faa NC_000921.faa.psort
Geobacter sulfurreducens PCA NC_002939.faa NC_002939.faa.psort
     
Other Phyla:    
Aquifex aeolicus VF5 NC_000918.faa NC_000918.faa.psort
Bacteroides thetaiotaomicron VPI-5482 NC_004663.faa NC_004663.faa.psort
Borrelia burgdorferi B31 NC_001318.faa NC_001318.faa.psort
Chlamydia muridarum NC_002620.faa NC_002620.faa.psort
Chlamydia trachomatis NC_000117.faa NC_000117.faa.psort
Chlamydophila caviae GPIC NC_003361.faa NC_003361.faa.psort
Chlamydophila pneumoniae AR39 NC_002179.faa NC_002179.faa.psort
Chlamydophila pneumoniae CWL029 NC_000922.faa NC_000922.faa.psort
Chlamydophila pneumoniae J138 NC_002491.faa NC_002491.faa.psort
Chlorobium tepidum TLS NC_002932.faa NC_002932.faa.psort
Deinococcus radiodurans R1 chromosome 1 NC_001263.faa NC_001263.faa.psort
Deinococcus radiodurans R1 chromosome 2 NC_001264.faa NC_001264.faa.psort
Enterococcus faecalis V583 NC_004668.faa NC_004668.faa.psort
Fusobacterium nucleatum subsp. nucleatum ATCC 25586 NC_003454.faa NC_003454.faa.psort
Leptospira interrogans serovar lai str. 56601 chromosome 1 NC_004342.faa NC_004342.faa.psort
Leptospira interrogans serovar lai str. 56601 chromosome 2 NC_004343.faa NC_004343.faa.psort
Mycoplasma genitalium NC_000908.faa NC_000908.faa.psort
Mycoplasma penetrans NC_004432.faa NC_004432.faa.psort
Mycoplasma pneumoniae NC_000912.faa NC_000912.faa.psort
Mycoplasma pulmonis NC_002771.faa NC_002771.faa.psort
Nostoc sp. PCC 7120 NC_003272.faa NC_003272.faa.psort
Synechocystis sp. PCC 6803 NC_000911.faa NC_000911.faa.psort
Thermoanaerobacter tengcongensis NC_003869.faa NC_003869.faa.psort
Thermosynechococcus elongatus BP-1 NC_004113.faa NC_004113.faa.psort
Thermotoga maritima MSB8 NC_000853.faa NC_000853.faa.psort
Treponema pallidum Nichols NC_000919.faa NC_000919.faa.psort
Ureaplasma urealyticum NC_002162.faa NC_002162.faa.psort